RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 DNERQ8NFT8 737 aa18.92■□□□□ 0.62
CCDC90B-202ENST00000455220 PURBQ96QR8 312 aaKnown RBP18.92■□□□□ 0.62
CCDC90B-202ENST00000455220 RMDN3Q96TC7 470 aa18.92■□□□□ 0.62
CCDC90B-202ENST00000455220 PXMP2Q9NR77 195 aa18.92■□□□□ 0.62
CCDC90B-202ENST00000455220 NOL7Q9UMY1 257 aaKnown RBP18.92■□□□□ 0.62
CCDC90B-202ENST00000455220 ASTN1O14525 1302 aa18.91■□□□□ 0.62
CCDC90B-202ENST00000455220 CYP3A4P08684 503 aa18.91■□□□□ 0.62
CCDC90B-202ENST00000455220 ADORA2AP29274 412 aa18.91■□□□□ 0.62
CCDC90B-202ENST00000455220 CTGFP29279 349 aa18.91■□□□□ 0.62
CCDC90B-202ENST00000455220 ARHGAP4P98171 946 aa18.91■□□□□ 0.62
CCDC90B-202ENST00000455220 CNTN2Q02246 1040 aa18.91■□□□□ 0.62
CCDC90B-202ENST00000455220 SP3Q02447 781 aa18.91■□□□□ 0.62
CCDC90B-202ENST00000455220 ATL3Q6DD88 541 aa18.91■□□□□ 0.62
CCDC90B-202ENST00000455220 FGD4Q96M96 766 aa18.91■□□□□ 0.62
CCDC90B-202ENST00000455220 PGK2P07205 417 aa18.9■□□□□ 0.62
CCDC90B-202ENST00000455220 USP11P51784 963 aa18.9■□□□□ 0.62
CCDC90B-202ENST00000455220 MORN1Q5T089 497 aa18.9■□□□□ 0.62
CCDC90B-202ENST00000455220 CLEC17AQ6ZS10 378 aa18.9■□□□□ 0.62
CCDC90B-202ENST00000455220 NSUN6Q8TEA1 469 aaKnown RBP18.9■□□□□ 0.62
CCDC90B-202ENST00000455220 PDCD2LQ9BRP1 358 aa18.9■□□□□ 0.62
CCDC90B-202ENST00000455220 WBP1LQ9NX94 342 aa18.9■□□□□ 0.62
CCDC90B-202ENST00000455220 PLXNA1Q9UIW2 1896 aa18.9■□□□□ 0.62
CCDC90B-202ENST00000455220 TCHHQ07283 1943 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 SOWAHBA6NEL2 793 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 GPR25O00155 361 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 WNT7AO00755 349 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 FCGRTP55899 365 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 DNM1Q05193 864 aaKnown RBP18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 PGM5Q15124 567 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 ZNF792Q3KQV3 632 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 TTC38Q5R3I4 469 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 MOXD1Q6UVY6 613 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 USP6NLQ92738 828 aa18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 ZNF396Q96N95 335 aaPredicted RBP18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 ADD3Q9UEY8 706 aaKnown RBP18.89■□□□□ 0.62
CCDC90B-202ENST00000455220 ZSWIM8A7E2V4 1837 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 LOC102724159A0A0B4J2E5 919 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 TNPO2O14787 897 aaKnown RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 COBLO75128 1261 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 EIF2AK2P19525 551 aaKnown RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 CIITAP33076 1130 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 ALDH5A1P51649 535 aaPredicted RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 ORC2Q13416 577 aaPredicted RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 PWP2Q15269 919 aaKnown RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 LETM2Q2VYF4 491 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 FOXD4L6Q3SYB3 417 aaPredicted RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 ARHGEF16Q5VV41 709 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 PCNX4Q63HM2 1172 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 XRRA1Q6P2D8 792 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 FOXD4L3Q6VB84 417 aaPredicted RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 IL31RAQ8NI17 732 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 CHAMP1Q96JM3 812 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 MBOAT7Q96N66 472 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 USP28Q96RU2 1077 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 IWS1Q96ST2 819 aa18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 NAP1L4Q99733 375 aaKnown RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 DIS3Q9Y2L1 958 aaKnown RBP18.89■□□□□ 0.61
CCDC90B-202ENST00000455220 CYP3A7-CYP3A51PA0A087WV96 503 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 GCFC2P16383 781 aaKnown RBP18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 CYP3A7P24462 503 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 EDNRBP24530 442 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 PSMC4P43686 418 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 NBR1Q14596 966 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 PPP4R3AQ6IN85 833 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 SOCS4Q8WXH5 440 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 TRIM47Q96LD4 638 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 BEGAINQ9BUH8 593 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 ARHGAP39Q9C0H5 1083 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 POLR3EQ9NVU0 708 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 GJD2Q9UKL4 321 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 PCDHB6Q9Y5E3 794 aa18.88■□□□□ 0.61
CCDC90B-202ENST00000455220 LRRC37A2A6NM11 1700 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 NR3C2P08235 984 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 HOXC6P09630 235 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 ATP2B1P20020 1258 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 NASPP49321 788 aaPredicted RBP18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 UBXN2AP68543 259 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 KRT85P78386 507 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 MAP2K5Q13163 448 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 ANO1Q5XXA6 986 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 ZNF467Q7Z7K2 595 aaPredicted RBP18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 VSIG10LQ86VR7 867 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 NUDT12Q9BQG2 462 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 FTOQ9C0B1 505 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 RTEL1Q9NZ71 1219 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 CFAP45Q9UL16 551 aa18.87■□□□□ 0.61
CCDC90B-202ENST00000455220 CCNT1O60563 726 aaKnown RBP18.86■□□□□ 0.61
CCDC90B-202ENST00000455220 TDP2O95551 362 aa18.86■□□□□ 0.61
CCDC90B-202ENST00000455220 MRPS9P82933 396 aaKnown RBP18.86■□□□□ 0.61
CCDC90B-202ENST00000455220 CAP1Q01518 475 aa18.86■□□□□ 0.61
CCDC90B-202ENST00000455220 KIF22Q14807 665 aa18.86■□□□□ 0.61
CCDC90B-202ENST00000455220 MORC4Q8TE76 937 aa18.86■□□□□ 0.61
CCDC90B-202ENST00000455220 CLIC4Q9Y696 253 aa18.86■□□□□ 0.61
CCDC90B-202ENST00000455220 MORC2Q9Y6X9 1032 aaPredicted RBP18.86■□□□□ 0.61
CCDC90B-202ENST00000455220 FAM86B1E9PN63 330 aa18.85■□□□□ 0.61
CCDC90B-202ENST00000455220 BAG4O95429 457 aaKnown RBP18.85■□□□□ 0.61
CCDC90B-202ENST00000455220 FAM86B2P0C5J1 330 aa18.85■□□□□ 0.61
CCDC90B-202ENST00000455220 CCND2P30279 289 aa18.85■□□□□ 0.61
CCDC90B-202ENST00000455220 PTPAQ15257 358 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms