RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 NKRFO15226 690 aaKnown RBP eCLIP10.86□□□□□ -0.67
ATXN3-205ENST00000454964 COBLO75128 1261 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 CCND2P30279 289 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 USP11P51784 963 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 PKN1Q16512 942 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 BRDTQ58F21 947 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-205ENST00000454964 WWC2Q6AWC2 1192 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 IQSEC1Q6DN90 963 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 NECAB1Q8N987 351 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 DAGLBQ8NCG7 672 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 SYTL5Q8TDW5 730 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-205ENST00000454964 MORC4Q8TE76 937 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 PIBF1Q8WXW3 757 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 ARMC5Q96C12 935 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 C8orf76Q96K31 380 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 LARP6Q9BRS8 491 aaKnown RBP10.86□□□□□ -0.67
ATXN3-205ENST00000454964 ALG1Q9BT22 464 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 ARHGAP39Q9C0H5 1083 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 SPC25Q9HBM1 224 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 Q9Y3F1 56 aa10.86□□□□□ -0.67
ATXN3-205ENST00000454964 MEIS2O14770 477 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 PPP1R11O60927 126 aaPredicted RBP10.85□□□□□ -0.67
ATXN3-205ENST00000454964 ALDH5A1P51649 535 aaPredicted RBP10.85□□□□□ -0.67
ATXN3-205ENST00000454964 GNL2Q13823 731 aaKnown RBP10.85□□□□□ -0.67
ATXN3-205ENST00000454964 PCNX4Q63HM2 1172 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 KRT25Q7Z3Z0 450 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 NLRX1Q86UT6 975 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 BLIDQ8IZY5 108 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 PHF20Q9BVI0 1012 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 FOXP1Q9H334 677 aaPredicted RBP10.85□□□□□ -0.67
ATXN3-205ENST00000454964 PXMP2Q9NR77 195 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 FAM184BQ9ULE4 1060 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 GABRQQ9UN88 632 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 KIAA1217Q5T5P2 1943 aa10.85□□□□□ -0.67
ATXN3-205ENST00000454964 CCDC194A0A1B0GVG4 234 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 H3BQV1 296 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 SEPT4O43236 478 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 PGK2P07205 417 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 NR3C2P08235 984 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 AKR1A1P14550 325 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 CTGFP29279 349 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 KRT2P35908 639 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 ANP32AP39687 249 aaKnown RBP10.84□□□□□ -0.67
ATXN3-205ENST00000454964 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
ATXN3-205ENST00000454964 SLC35G1Q2M3R5 365 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 IFFO2Q5TF58 517 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 NIPA1Q7RTP0 329 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 VSIG10LQ86VR7 867 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 FCHSD1Q86WN1 690 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 ARRDC4Q8NCT1 418 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 FBXO18Q8NFZ0 1043 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 SCFD2Q8WU76 684 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.67
ATXN3-205ENST00000454964 SEZ6LQ9BYH1 1024 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 PCDHA6Q9UN73 950 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 PCDHA8Q9Y5H6 950 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 PTCH2Q9Y6C5 1203 aa10.84□□□□□ -0.67
ATXN3-205ENST00000454964 MCM3APO60318 1980 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 PITPNM1O00562 1244 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 ZEB2O60315 1214 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 KPNA6O60684 536 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 CTDNEP1O95476 244 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 IGHA2P01877 340 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 CYP3A4P08684 503 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 GCFC2P16383 781 aaKnown RBP10.83□□□□□ -0.68
ATXN3-205ENST00000454964 EDNRBP24530 442 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 ZNF76P36508 570 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 CLK2P49760 499 aaKnown RBP10.83□□□□□ -0.68
ATXN3-205ENST00000454964 ORC2Q13416 577 aaPredicted RBP10.83□□□□□ -0.68
ATXN3-205ENST00000454964 ACVR2BQ13705 512 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 TTLL4Q14679 1199 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 NONOQ15233 471 aaKnown RBP eCLIP10.83□□□□□ -0.68
ATXN3-205ENST00000454964 MAP3K21Q5TCX8 1036 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 LARP1BQ659C4 914 aaKnown RBP10.83□□□□□ -0.68
ATXN3-205ENST00000454964 MOXD1Q6UVY6 613 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 ARMCX2Q7L311 632 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 NPLOC4Q8TAT6 608 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 TAAR1Q96RJ0 339 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 PDCD2LQ9BRP1 358 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 MCOLN1Q9GZU1 580 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.83□□□□□ -0.68
ATXN3-205ENST00000454964 VPS54Q9P1Q0 977 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 FRMPD4Q14CM0 1322 aa10.83□□□□□ -0.68
ATXN3-205ENST00000454964 hCG_1642624A0A1W2PR95 340 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 RBM47A0AV96 593 aaKnown RBP10.82□□□□□ -0.68
ATXN3-205ENST00000454964 SOWAHBA6NEL2 793 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 OPLAHO14841 1288 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 PEX10O60683 326 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 DUSP11O75319 330 aaKnown RBP10.82□□□□□ -0.68
ATXN3-205ENST00000454964 LARGE1O95461 756 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 MMP1P03956 469 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 INHAP05111 366 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 RARBP10826 455 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
ATXN3-205ENST00000454964 FDPSP14324 419 aaKnown RBP10.82□□□□□ -0.68
ATXN3-205ENST00000454964 GJB2P29033 226 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 SREBF1P36956 1147 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 TRAPPC10P48553 1259 aa10.82□□□□□ -0.68
ATXN3-205ENST00000454964 SETQ01105 290 aaPredicted RBP10.82□□□□□ -0.68
ATXN3-205ENST00000454964 CNTN2Q02246 1040 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms