RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 DNERQ8NFT8 737 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 RASGRP4Q8TDF6 673 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 SH3TC2Q8TF17 1288 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 PGBD1Q96JS3 809 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 RMDN3Q96TC7 470 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 TINF2Q9BSI4 451 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 MCOLN1Q9GZU1 580 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 GLT8D2Q9H1C3 349 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 BIN2Q9UBW5 565 aaPredicted RBP14.94□□□□□ -0.02
VPS33A-202ENST00000451053 ADD3Q9UEY8 706 aaKnown RBP14.94□□□□□ -0.02
VPS33A-202ENST00000451053 PCDHA4Q9UN74 947 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 RPTORQ8N122 1335 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 LRRC37A2A6NM11 1700 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 HMGCRP04035 888 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 EIF2AK2P19525 551 aaKnown RBP14.93□□□□□ -0.02
VPS33A-202ENST00000451053 GUCY1B3Q02153 619 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 COL13A1Q5TAT6 717 aaPredicted RBP14.93□□□□□ -0.02
VPS33A-202ENST00000451053 JAKMIP3Q5VZ66 844 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 KRT40Q6A162 431 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 MAMDC4Q6UXC1 1216 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 ARMCX2Q7L311 632 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 TRMT44Q8IYL2 757 aaKnown RBP14.93□□□□□ -0.02
VPS33A-202ENST00000451053 BLIDQ8IZY5 108 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 REXO1Q8N1G1 1221 aaKnown RBP14.93□□□□□ -0.02
VPS33A-202ENST00000451053 DAGLBQ8NCG7 672 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 IL31RAQ8NI17 732 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 OXER1Q8TDS5 423 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 NSUN6Q8TEA1 469 aaKnown RBP14.93□□□□□ -0.02
VPS33A-202ENST00000451053 C8orf76Q96K31 380 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 PXMP2Q9NR77 195 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 CIZ1Q9ULV3 898 aaPredicted RBP14.93□□□□□ -0.02
VPS33A-202ENST00000451053 PCDHA6Q9UN73 950 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 PCDHA8Q9Y5H6 950 aa14.93□□□□□ -0.02
VPS33A-202ENST00000451053 FRMPD4Q14CM0 1322 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 SYNGAP1Q96PV0 1343 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 ASB14A6NK59 587 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 SNAI1O95863 264 aaPredicted RBP14.92□□□□□ -0.02
VPS33A-202ENST00000451053 MMP1P03956 469 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 PDCP20941 246 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 EDNRBP24530 442 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 TRIM29Q14134 588 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 PGM5Q15124 567 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 SLC9C1Q4G0N8 1177 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 ARHGEF16Q5VV41 709 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 MFSD14CQ5VZR4 134 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 TEX2Q8IWB9 1127 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 MSL3Q8N5Y2 521 aaKnown RBP14.92□□□□□ -0.02
VPS33A-202ENST00000451053 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 MORC4Q8TE76 937 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 PDCD2LQ9BRP1 358 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 ANO3Q9BYT9 981 aa14.92□□□□□ -0.02
VPS33A-202ENST00000451053 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.92□□□□□ -0.02
VPS33A-202ENST00000451053 SPDYE3A6NKU9 549 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 M0R2N6 131 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 INHAP05111 366 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 CACNB2Q08289 660 aaPredicted RBP14.91□□□□□ -0.02
VPS33A-202ENST00000451053 PDE4DQ08499 809 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 AP3B2Q13367 1082 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 PRAMEF19Q5SWL8 479 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 GALNT17Q6IS24 598 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 TRPV1Q8NER1 839 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 FBXO18Q8NFZ0 1043 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 MCM3APO60318 1980 aa14.91□□□□□ -0.02
VPS33A-202ENST00000451053 LOC102724159A0A0B4J2E5 919 aa14.9□□□□□ -0.02
VPS33A-202ENST00000451053 FOSP01100 380 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-202ENST00000451053 NR3C2P08235 984 aa14.9□□□□□ -0.02
VPS33A-202ENST00000451053 MYCLP12524 364 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-202ENST00000451053 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
VPS33A-202ENST00000451053 KRT2P35908 639 aa14.9□□□□□ -0.02
VPS33A-202ENST00000451053 NR5A1Q13285 461 aa14.9□□□□□ -0.02
VPS33A-202ENST00000451053 PWP2Q15269 919 aaKnown RBP14.9□□□□□ -0.02
VPS33A-202ENST00000451053 MAP3K21Q5TCX8 1036 aa14.9□□□□□ -0.02
VPS33A-202ENST00000451053 EEPD1Q7L9B9 569 aa14.9□□□□□ -0.02
VPS33A-202ENST00000451053 FBXO16Q8IX29 292 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-202ENST00000451053 DIS3L2Q8IYB7 885 aaKnown RBP14.9□□□□□ -0.02
VPS33A-202ENST00000451053 ZFP91Q96JP5 570 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-202ENST00000451053 IWS1Q96ST2 819 aa14.9□□□□□ -0.02
VPS33A-202ENST00000451053 KATNBL1Q9H079 304 aa14.9□□□□□ -0.02
VPS33A-202ENST00000451053 BTBD18B2RXH4 712 aa14.89□□□□□ -0.03
VPS33A-202ENST00000451053 CYBAP13498 195 aa14.89□□□□□ -0.03
VPS33A-202ENST00000451053 CCND2P30279 289 aa14.89□□□□□ -0.03
VPS33A-202ENST00000451053 NUCB2P80303 420 aa14.89□□□□□ -0.03
VPS33A-202ENST00000451053 LARP1BQ659C4 914 aaKnown RBP14.89□□□□□ -0.03
VPS33A-202ENST00000451053 TNFRSF25Q93038 417 aa14.89□□□□□ -0.03
VPS33A-202ENST00000451053 MPHOSPH6Q99547 160 aaKnown RBP14.89□□□□□ -0.03
VPS33A-202ENST00000451053 BRMS1Q9HCU9 246 aa14.89□□□□□ -0.03
VPS33A-202ENST00000451053 CHMP5Q9NZZ3 219 aa14.89□□□□□ -0.03
VPS33A-202ENST00000451053 ZHX1Q9UKY1 873 aaPredicted RBP14.89□□□□□ -0.03
VPS33A-202ENST00000451053 CNPY2Q9Y2B0 182 aa14.89□□□□□ -0.03
VPS33A-202ENST00000451053 FAM205CA6NFA0 338 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 B4DLN1 442 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 MYCP01106 439 aaPredicted RBP14.88□□□□□ -0.03
VPS33A-202ENST00000451053 ZNF865P0CJ78 1059 aaPredicted RBP14.88□□□□□ -0.03
VPS33A-202ENST00000451053 CCND3P30281 292 aaPredicted RBP14.88□□□□□ -0.03
VPS33A-202ENST00000451053 DDIT3P35638 169 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 SREBF1P36956 1147 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 MRPS9P82933 396 aaKnown RBP14.88□□□□□ -0.03
VPS33A-202ENST00000451053 ACVR2BQ13705 512 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 MTFR1Q15390 333 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 STXBP2Q15833 593 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms