RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 PGK1P00558 417 aa23.68■■□□□ 1.38
CCHCR1-206ENST00000448141 STK3Q13188 491 aa23.68■■□□□ 1.38
CCHCR1-206ENST00000448141 C11orf49Q9H6J7 331 aa23.68■■□□□ 1.38
CCHCR1-206ENST00000448141 KIAA1217Q5T5P2 1943 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 SYNRGQ9UMZ2 1314 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 DNM1LO00429 736 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 DUSP11O75319 330 aaKnown RBP23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 NEK4P51957 841 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 AK2P54819 239 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 LRRC41Q15345 812 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 USP17L6PQ6QN14 398 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 NOL8Q76FK4 1167 aaKnown RBP23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 CUL5Q93034 780 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 PHKBQ93100 1093 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 IWS1Q96ST2 819 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 PSTPIP2Q9H939 334 aa23.67■■□□□ 1.38
CCHCR1-206ENST00000448141 KBTBD13C9JR72 458 aa23.66■■□□□ 1.38
CCHCR1-206ENST00000448141 PPFIA3O75145 1194 aa23.66■■□□□ 1.38
CCHCR1-206ENST00000448141 ANKRD1Q15327 319 aa23.66■■□□□ 1.38
CCHCR1-206ENST00000448141 NTRK3Q16288 839 aa23.66■■□□□ 1.38
CCHCR1-206ENST00000448141 IQSEC1Q6DN90 963 aa23.66■■□□□ 1.38
CCHCR1-206ENST00000448141 SMARCC2Q8TAQ2 1214 aa23.66■■□□□ 1.38
CCHCR1-206ENST00000448141 C22orf23Q9BZE7 217 aa23.66■■□□□ 1.38
CCHCR1-206ENST00000448141 ALPK3Q96L96 1907 aa23.66■■□□□ 1.38
CCHCR1-206ENST00000448141 STXBP3O00186 592 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 PIK3CDO00329 1044 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 MEIS2O14770 477 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 ADAMTS4O75173 837 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 NR3C2P08235 984 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 COL6A1P12109 1028 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 IFNAR1P17181 557 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 SMPD1P17405 629 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 NAPAP54920 295 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 STXBP2Q15833 593 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 TMEM63BQ5T3F8 832 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 TYW1BQ6NUM6 668 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 RNF180Q86T96 592 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 PDCD2LQ9BRP1 358 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 HTATIP2Q9BUP3 242 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 TPCN1Q9ULQ1 816 aa23.65■■□□□ 1.38
CCHCR1-206ENST00000448141 hCG_1984214I3L0E3 225 aa23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 PRPF3O43395 683 aaKnown RBP23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 MYCLP12524 364 aaPredicted RBP23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 SCG2P13521 617 aa23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 PTGS1P23219 599 aa23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 IRX5P78411 483 aaPredicted RBP23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 PGM5Q15124 567 aa23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 PFKFB3Q16875 520 aaPredicted RBP23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 ZNF713Q8N859 430 aaPredicted RBP23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 IL31RAQ8NI17 732 aa23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 SLC26A6Q9BXS9 759 aa23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 WDR11Q9BZH6 1224 aa23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 BARHL2Q9NY43 387 aa23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 GNEQ9Y223 722 aaKnown RBP23.64■■□□□ 1.37
CCHCR1-206ENST00000448141 RBM47A0AV96 593 aaKnown RBP23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 CPLX1O14810 134 aa23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 C6orf222P0C671 652 aaPredicted RBP23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 GJA9P57773 515 aa23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 AKAP17AQ02040 695 aaKnown RBP23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 UBE2SQ16763 222 aa23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 PPP1R18Q6NYC8 613 aa23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 SENP6Q9GZR1 1112 aaPredicted RBP23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 UPF3AQ9H1J1 476 aaKnown RBP23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 SPC25Q9HBM1 224 aa23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 RBM27Q9P2N5 1060 aaKnown RBP23.63■■□□□ 1.37
CCHCR1-206ENST00000448141 MYADML2A6NDP7 307 aa23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 EIF3JO75822 258 aaKnown RBP23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 PKN1Q16512 942 aa23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 DUSP28Q4G0W2 176 aa23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 SEPT14Q6ZU15 432 aa23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 TLK2Q86UE8 772 aa23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 KLHDC9Q8NEP7 349 aa23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 SCFD2Q8WU76 684 aa23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 DPF3Q92784 378 aa23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 RNF26Q9BY78 433 aaPredicted RBP23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 AP5M1Q9H0R1 490 aa23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 SLKQ9H2G2 1235 aaPredicted RBP23.62■■□□□ 1.37
CCHCR1-206ENST00000448141 FRMPD4Q14CM0 1322 aa23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 DYNC1LI2O43237 492 aaPredicted RBP23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 PFKFB2O60825 505 aa23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 CCND2P30279 289 aa23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 RBM25P49756 843 aaKnown RBP23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 ADCY7P51828 1080 aa23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 SCRN1Q12765 414 aa23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 VSIG10LQ86VR7 867 aa23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 FERMT2Q96AC1 680 aa23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 ZFP91Q96JP5 570 aaPredicted RBP23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 KIF2CQ99661 725 aa23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 UPF2Q9HAU5 1272 aaKnown RBP23.61■■□□□ 1.37
CCHCR1-206ENST00000448141 SMCO2A6NFE2 343 aa23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 TXNP10599 105 aaKnown RBP23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 SSRP1Q08945 709 aaKnown RBP23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 KCNA10Q16322 511 aa23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 GNASQ5JWF2 1037 aa23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 CPLX2Q6PUV4 134 aaKnown RBP23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 TRIM22Q8IYM9 498 aa23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 RIC8AQ9NPQ8 531 aa23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 PHF24Q9UPV7 400 aa23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 PDE4DIPQ5VU43 2346 aa23.6■■□□□ 1.37
CCHCR1-206ENST00000448141 CTAGE5O15320 804 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms