RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 R3HDMLQ9H3Y0 253 aa22.23■■□□□ 1.15
SGCE-207ENST00000447873 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.23■■□□□ 1.15
SGCE-207ENST00000447873 YEATS4O95619 227 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 BCRP11274 1271 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 MCM4P33991 863 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 MCM7P33993 719 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 KCTD2Q14681 263 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 C17orf99Q6UX52 265 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.22■■□□□ 1.15
SGCE-207ENST00000447873 LINC00301Q8NCQ3 95 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 LEO1Q8WVC0 666 aaPredicted RBP22.22■■□□□ 1.15
SGCE-207ENST00000447873 TAAR1Q96RJ0 339 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 MMP19Q99542 508 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 RCOR1Q9UKL0 485 aa22.22■■□□□ 1.15
SGCE-207ENST00000447873 FCER1AP12319 257 aa22.21■■□□□ 1.15
SGCE-207ENST00000447873 RMDN3Q96TC7 470 aa22.21■■□□□ 1.15
SGCE-207ENST00000447873 NAP1L4Q99733 375 aaKnown RBP22.21■■□□□ 1.15
SGCE-207ENST00000447873 ZNFX1Q9P2E3 1918 aaKnown RBP22.21■■□□□ 1.15
SGCE-207ENST00000447873 BMP15O95972 392 aa22.21■■□□□ 1.15
SGCE-207ENST00000447873 UBXN2AP68543 259 aa22.21■■□□□ 1.15
SGCE-207ENST00000447873 SLC39A14Q15043 492 aa22.21■■□□□ 1.15
SGCE-207ENST00000447873 KCNG4Q8TDN1 519 aa22.21■■□□□ 1.15
SGCE-207ENST00000447873 CRYGNQ8WXF5 182 aa22.21■■□□□ 1.15
SGCE-207ENST00000447873 PURBQ96QR8 312 aaKnown RBP22.21■■□□□ 1.15
SGCE-207ENST00000447873 PLXNB2O15031 1838 aa22.2■■□□□ 1.14
SGCE-207ENST00000447873 SPTLC2O15270 562 aa22.2■■□□□ 1.14
SGCE-207ENST00000447873 PRPF40AO75400 957 aaKnown RBP22.2■■□□□ 1.14
SGCE-207ENST00000447873 MAPK4P31152 587 aa22.2■■□□□ 1.14
SGCE-207ENST00000447873 PTPAQ15257 358 aa22.2■■□□□ 1.14
SGCE-207ENST00000447873 ARHGEF16Q5VV41 709 aa22.2■■□□□ 1.14
SGCE-207ENST00000447873 PPP4R3AQ6IN85 833 aa22.2■■□□□ 1.14
SGCE-207ENST00000447873 PXMP2Q9NR77 195 aa22.2■■□□□ 1.14
SGCE-207ENST00000447873 IVNS1ABPQ9Y6Y0 642 aa22.2■■□□□ 1.14
SGCE-207ENST00000447873 RPTORQ8N122 1335 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 LCTP09848 1927 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 DDX11L8A8MPP1 907 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 POTEB2H3BUK9 544 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 EDIL3O43854 480 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 TDP2O95551 362 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 CYP3A4P08684 503 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 GCFC2P16383 781 aaKnown RBP22.19■■□□□ 1.14
SGCE-207ENST00000447873 EIF2AK2P19525 551 aaKnown RBP22.19■■□□□ 1.14
SGCE-207ENST00000447873 ZNF76P36508 570 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 ORC2Q13416 577 aaPredicted RBP22.19■■□□□ 1.14
SGCE-207ENST00000447873 TMEM87AQ8NBN3 555 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 NSUN6Q8TEA1 469 aaKnown RBP22.19■■□□□ 1.14
SGCE-207ENST00000447873 ELP1O95163 1332 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 FRMPD4Q14CM0 1322 aa22.19■■□□□ 1.14
SGCE-207ENST00000447873 STRNO43815 780 aa22.18■■□□□ 1.14
SGCE-207ENST00000447873 HSPA6P17066 643 aa22.18■■□□□ 1.14
SGCE-207ENST00000447873 C1QTNF8P60827 252 aa22.18■■□□□ 1.14
SGCE-207ENST00000447873 PTGDRQ13258 359 aa22.18■■□□□ 1.14
SGCE-207ENST00000447873 NFKBIBQ15653 356 aa22.18■■□□□ 1.14
SGCE-207ENST00000447873 MOXD1Q6UVY6 613 aa22.18■■□□□ 1.14
SGCE-207ENST00000447873 JMYQ8N9B5 988 aa22.18■■□□□ 1.14
SGCE-207ENST00000447873 DDX25Q9UHL0 483 aaKnown RBP22.18■■□□□ 1.14
SGCE-207ENST00000447873 NEMFO60524 1076 aa22.17■■□□□ 1.14
SGCE-207ENST00000447873 MARCKSP29966 332 aaPredicted RBP22.17■■□□□ 1.14
SGCE-207ENST00000447873 ME1P48163 572 aa22.17■■□□□ 1.14
SGCE-207ENST00000447873 CNTN2Q02246 1040 aa22.17■■□□□ 1.14
SGCE-207ENST00000447873 PGM5Q15124 567 aa22.17■■□□□ 1.14
SGCE-207ENST00000447873 GPR142Q7Z601 462 aa22.17■■□□□ 1.14
SGCE-207ENST00000447873 DNERQ8NFT8 737 aa22.17■■□□□ 1.14
SGCE-207ENST00000447873 CYP3A7-CYP3A51PA0A087WV96 503 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 PPP6R2O75170 966 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 PGK2P07205 417 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 CYP3A7P24462 503 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 CIITAP33076 1130 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 PCNX4Q63HM2 1172 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 PLEKHH3Q7Z736 793 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 ABRAQ8N0Z2 381 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 FAM133AQ8N9E0 248 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 PDCD2LQ9BRP1 358 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 ADD3Q9UEY8 706 aaKnown RBP22.16■■□□□ 1.14
SGCE-207ENST00000447873 THSD7BQ9C0I4 1608 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 LAD1O00515 517 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 ATP2C1P98194 919 aaPredicted RBP22.16■■□□□ 1.14
SGCE-207ENST00000447873 IL31RAQ8NI17 732 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 MRVI1Q9Y6F6 885 aa22.16■■□□□ 1.14
SGCE-207ENST00000447873 DNAJC25-GNG10A0A024R161 153 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 GOLGA6L4A6NEF3 574 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 FAM86B1E9PN63 330 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 SLC37A4O43826 429 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 TBC1D8O95759 1140 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 FAM86B2P0C5J1 330 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 MYCLP12524 364 aaPredicted RBP22.15■■□□□ 1.14
SGCE-207ENST00000447873 PTPREP23469 700 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 ADORA2AP29274 412 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 PRR16Q569H4 304 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 XRRA1Q6P2D8 792 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 POTEDQ86YR6 584 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 C4orf32Q8N8J7 132 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 LMBRD1Q9NUN5 540 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 RNF186Q9NXI6 227 aa22.15■■□□□ 1.14
SGCE-207ENST00000447873 TRPA1O75762 1119 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 NR3C2P08235 984 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 CCND2P30279 289 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 CALCRLQ16602 461 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 Q4G0T1 1027 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 TPRNQ4KMQ1 711 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms