RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 VEZTQ9HBM0 779 aa13.29□□□□□ -0.28
APLF-203ENST00000445692 DISC1Q9NRI5 854 aa13.29□□□□□ -0.28
APLF-203ENST00000445692 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
APLF-203ENST00000445692 PKD2L1Q9P0L9 805 aa13.29□□□□□ -0.28
APLF-203ENST00000445692 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
APLF-203ENST00000445692 PCDH11XQ9BZA7 1347 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 PCDH11YQ9BZA8 1340 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 SALL1Q9NSC2 1324 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 CEMIPQ8WUJ3 1361 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 C6orf229H3BNL8 230 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 CTNND1O60716 968 aaKnown RBP13.28□□□□□ -0.28
APLF-203ENST00000445692 EEF1GP26641 437 aaKnown RBP13.28□□□□□ -0.28
APLF-203ENST00000445692 GNAQP50148 359 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 CAPN12Q6ZSI9 719 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 TBC1D1Q86TI0 1168 aaPredicted RBP13.28□□□□□ -0.28
APLF-203ENST00000445692 DDX47Q9H0S4 455 aaKnown RBP13.28□□□□□ -0.28
APLF-203ENST00000445692 TMX4Q9H1E5 349 aaPredicted RBP13.28□□□□□ -0.28
APLF-203ENST00000445692 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 TMEM94Q12767 1356 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 CDC42BPGQ6DT37 1551 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 CHMP2AO43633 222 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 SLC44A5Q8NCS7 719 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 NKX2-3Q8TAU0 364 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 CAPN6Q9Y6Q1 641 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 KLRF2D3W0D1 207 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 OR52Z1P0C646 297 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 SLC1A4P43007 532 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 TBC1D10BQ4KMP7 808 aaPredicted RBP13.28□□□□□ -0.28
APLF-203ENST00000445692 SMIM5Q71RC9 77 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 TMEM139Q8IV31 216 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 PPP1R12CQ9BZL4 782 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 PSD3Q9NYI0 1048 aa13.28□□□□□ -0.28
APLF-203ENST00000445692 UTP11Q9Y3A2 253 aaKnown RBP13.28□□□□□ -0.28
APLF-203ENST00000445692 TBCAO75347 108 aaKnown RBP13.27□□□□□ -0.28
APLF-203ENST00000445692 GNA11P29992 359 aa13.27□□□□□ -0.28
APLF-203ENST00000445692 DHX9Q08211 1270 aaKnown RBP13.27□□□□□ -0.28
APLF-203ENST00000445692 SNCBQ16143 134 aa13.27□□□□□ -0.28
APLF-203ENST00000445692 GKAP1Q5VSY0 366 aaPredicted RBP13.27□□□□□ -0.28
APLF-203ENST00000445692 ANKRD40Q6AI12 368 aa13.27□□□□□ -0.28
APLF-203ENST00000445692 GIGYF2Q6Y7W6 1299 aaKnown RBP13.27□□□□□ -0.28
APLF-203ENST00000445692 RUFY4Q6ZNE9 571 aa13.27□□□□□ -0.28
APLF-203ENST00000445692 ZIM3Q96PE6 472 aa13.27□□□□□ -0.28
APLF-203ENST00000445692 HSD3B7Q9H2F3 369 aa13.27□□□□□ -0.28
APLF-203ENST00000445692 CCNE1P24864 410 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 TBX2Q13207 712 aaPredicted RBP13.27□□□□□ -0.29
APLF-203ENST00000445692 IFI16Q16666 785 aaKnown RBP13.27□□□□□ -0.29
APLF-203ENST00000445692 USP17L2Q6R6M4 530 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 OTUD6AQ7L8S5 288 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 AGXT2Q9BYV1 514 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 CPDO75976 1380 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 SRCAPQ6ZRS2 3230 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 LONP1P36776 959 aaKnown RBP13.27□□□□□ -0.29
APLF-203ENST00000445692 PMS1P54277 932 aaKnown RBP13.27□□□□□ -0.29
APLF-203ENST00000445692 PLTPP55058 493 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 STK4Q13043 487 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 MSANTD4Q8NCY6 345 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 CERKQ8TCT0 537 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 GEMIN8Q9NWZ8 242 aaKnown RBP13.27□□□□□ -0.29
APLF-203ENST00000445692 PTPN22Q9Y2R2 807 aa13.27□□□□□ -0.29
APLF-203ENST00000445692 TULP2O00295 520 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 MAP2K7O14733 419 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 BAG3O95817 575 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 SGMS1Q86VZ5 419 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 NBPF5PQ86XG9 351 aaPredicted RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 LRRC47Q8N1G4 583 aaKnown RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 STAG2Q8N3U4 1231 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 RGPD8O14715 1765 aaPredicted RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 PDE2AO00408 941 aaPredicted RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 CETN3O15182 167 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 EIF3HO15372 352 aaKnown RBP eCLIP13.26□□□□□ -0.29
APLF-203ENST00000445692 NTRK3Q16288 839 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 TXNRD1Q16881 649 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 SRBD1Q8N5C6 995 aaKnown RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 HNRNPLLQ8WVV9 542 aaKnown RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 COA7Q96BR5 231 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 RNPC3Q96LT9 517 aaKnown RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 XDHP47989 1333 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 POTEMA6NI47 508 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 HDLBPQ00341 1268 aaKnown RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 CYP4A11Q02928 519 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 CCDC6Q16204 474 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 GJA10Q969M2 543 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 ARPP21Q9UBL0 812 aaPredicted RBP13.26□□□□□ -0.29
APLF-203ENST00000445692 BCS1LQ9Y276 419 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 HEG1Q9ULI3 1381 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 ANKARQ7Z5J8 1434 aa13.26□□□□□ -0.29
APLF-203ENST00000445692 RGS16O15492 202 aaPredicted RBP13.25□□□□□ -0.29
APLF-203ENST00000445692 PRPF3O43395 683 aaKnown RBP13.25□□□□□ -0.29
APLF-203ENST00000445692 HERVK_113P62684 666 aa13.25□□□□□ -0.29
APLF-203ENST00000445692 REXO1Q8N1G1 1221 aaKnown RBP13.25□□□□□ -0.29
APLF-203ENST00000445692 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
APLF-203ENST00000445692 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
APLF-203ENST00000445692 SNX12Q9UMY4 172 aa13.25□□□□□ -0.29
APLF-203ENST00000445692 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
APLF-203ENST00000445692 WNT7AO00755 349 aa13.25□□□□□ -0.29
APLF-203ENST00000445692 MAGOHP61326 146 aaKnown RBP13.25□□□□□ -0.29
APLF-203ENST00000445692 MYOCDQ8IZQ8 938 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms