RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 MRPL38Q96DV4 380 aaKnown RBP16.54■□□□□ 0.24
SHANK2-209ENST00000445654 POP1Q99575 1024 aaKnown RBP16.54■□□□□ 0.24
SHANK2-209ENST00000445654 CCPG1Q9ULG6 757 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 INSL6Q9Y581 213 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 PTPRSQ13332 1948 aa16.54■□□□□ 0.24
SHANK2-209ENST00000445654 PTGS1P23219 599 aa16.53■□□□□ 0.24
SHANK2-209ENST00000445654 TDO2P48775 406 aa16.53■□□□□ 0.24
SHANK2-209ENST00000445654 RBL2Q08999 1139 aa16.53■□□□□ 0.24
SHANK2-209ENST00000445654 SLFNL1Q499Z3 407 aa16.53■□□□□ 0.24
SHANK2-209ENST00000445654 RCSD1Q6JBY9 416 aa16.53■□□□□ 0.24
SHANK2-209ENST00000445654 LRRC8DQ7L1W4 858 aa16.53■□□□□ 0.24
SHANK2-209ENST00000445654 SESTD1Q86VW0 696 aa16.53■□□□□ 0.24
SHANK2-209ENST00000445654 MTUS1Q9ULD2 1270 aa16.53■□□□□ 0.24
SHANK2-209ENST00000445654 BRWD1Q9NSI6 2320 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 NCK2O43639 380 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 CXCL10P02778 98 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 ICAM1P05362 532 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 FOXK2Q01167 660 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 PDE4DQ08499 809 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 TMEM63BQ5T3F8 832 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 SPRED2Q7Z698 418 aa16.52■□□□□ 0.24
SHANK2-209ENST00000445654 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
SHANK2-209ENST00000445654 PTPN5P54829 565 aa16.51■□□□□ 0.23
SHANK2-209ENST00000445654 DEFB103AP81534 67 aa16.51■□□□□ 0.23
SHANK2-209ENST00000445654 ADHFE1Q8IWW8 467 aa16.51■□□□□ 0.23
SHANK2-209ENST00000445654 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
SHANK2-209ENST00000445654 PRR12Q9ULL5 1215 aa16.51■□□□□ 0.23
SHANK2-209ENST00000445654 C19orf67A6NJJ6 358 aa16.5■□□□□ 0.23
SHANK2-209ENST00000445654 PRDM1O75626 825 aa16.5■□□□□ 0.23
SHANK2-209ENST00000445654 MCCP23508 829 aa16.5■□□□□ 0.23
SHANK2-209ENST00000445654 ZP2Q05996 745 aa16.5■□□□□ 0.23
SHANK2-209ENST00000445654 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
SHANK2-209ENST00000445654 DNERQ8NFT8 737 aa16.5■□□□□ 0.23
SHANK2-209ENST00000445654 TET1Q8NFU7 2136 aa16.5■□□□□ 0.23
SHANK2-209ENST00000445654 APPBP2Q92624 585 aa16.5■□□□□ 0.23
SHANK2-209ENST00000445654 PTPDC1A2A3K4 754 aa16.49■□□□□ 0.23
SHANK2-209ENST00000445654 AMHP03971 560 aa16.49■□□□□ 0.23
SHANK2-209ENST00000445654 APPP05067 770 aa16.49■□□□□ 0.23
SHANK2-209ENST00000445654 ZFYP08048 801 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-209ENST00000445654 BANK1Q8NDB2 785 aa16.49■□□□□ 0.23
SHANK2-209ENST00000445654 DDX49Q9Y6V7 483 aaKnown RBP16.49■□□□□ 0.23
SHANK2-209ENST00000445654 LCTP09848 1927 aa16.49■□□□□ 0.23
SHANK2-209ENST00000445654 EMSYQ7Z589 1322 aa16.48■□□□□ 0.23
SHANK2-209ENST00000445654 TRIP12Q14669 1992 aaPredicted RBP16.48■□□□□ 0.23
SHANK2-209ENST00000445654 H3BQ06 376 aaPredicted RBP16.48■□□□□ 0.23
SHANK2-209ENST00000445654 TXNP10599 105 aaKnown RBP16.48■□□□□ 0.23
SHANK2-209ENST00000445654 TFAP4Q01664 338 aa16.48■□□□□ 0.23
SHANK2-209ENST00000445654 HFE2Q6ZVN8 426 aa16.48■□□□□ 0.23
SHANK2-209ENST00000445654 KCTD1Q719H9 257 aa16.48■□□□□ 0.23
SHANK2-209ENST00000445654 BMP8AQ7Z5Y6 402 aa16.48■□□□□ 0.23
SHANK2-209ENST00000445654 KATNAL1Q9BW62 490 aa16.48■□□□□ 0.23
SHANK2-209ENST00000445654 IRF2BPLQ9H1B7 796 aa16.48■□□□□ 0.23
SHANK2-209ENST00000445654 RANBP17Q9H2T7 1088 aaKnown RBP16.48■□□□□ 0.23
SHANK2-209ENST00000445654 NSUN3Q9H649 340 aaKnown RBP16.48■□□□□ 0.23
SHANK2-209ENST00000445654 MS4A1P11836 297 aa16.47■□□□□ 0.23
SHANK2-209ENST00000445654 CKBP12277 381 aa16.47■□□□□ 0.23
SHANK2-209ENST00000445654 CASTP20810 708 aaKnown RBP16.47■□□□□ 0.23
SHANK2-209ENST00000445654 CHMP4BP1P59074 171 aa16.47■□□□□ 0.23
SHANK2-209ENST00000445654 HERC4Q5GLZ8 1057 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-209ENST00000445654 GDF6Q6KF10 455 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-209ENST00000445654 EP400NLQ6ZTU2 488 aa16.47■□□□□ 0.23
SHANK2-209ENST00000445654 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-209ENST00000445654 DCAF4Q8WV16 495 aa16.47■□□□□ 0.23
SHANK2-209ENST00000445654 BCL11AQ9H165 835 aa16.47■□□□□ 0.23
SHANK2-209ENST00000445654 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
SHANK2-209ENST00000445654 PATL2C9JE40 543 aaKnown RBP16.46■□□□□ 0.23
SHANK2-209ENST00000445654 H3BNC9 293 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 GPAA1O43292 621 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 NBNO60934 754 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 CHGBP05060 677 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 RLBP1P12271 317 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 EDNRBP24530 442 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 HTRA4P83105 476 aaPredicted RBP16.46■□□□□ 0.23
SHANK2-209ENST00000445654 PTK7Q13308 1070 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 GPNMBQ14956 572 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 COL19A1Q14993 1142 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 RNF207Q6ZRF8 634 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 C7orf31Q8N865 590 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 SP7Q8TDD2 431 aaPredicted RBP16.46■□□□□ 0.23
SHANK2-209ENST00000445654 PURBQ96QR8 312 aaKnown RBP16.46■□□□□ 0.23
SHANK2-209ENST00000445654 C17orf80Q9BSJ5 609 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 MAF1Q9H063 256 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.23
SHANK2-209ENST00000445654 LGR5O75473 907 aa16.45■□□□□ 0.22
SHANK2-209ENST00000445654 GH1P01241 217 aa16.45■□□□□ 0.22
SHANK2-209ENST00000445654 CALML3P27482 149 aa16.45■□□□□ 0.22
SHANK2-209ENST00000445654 GPM6BQ13491 265 aa16.45■□□□□ 0.22
SHANK2-209ENST00000445654 CCDC96Q2M329 555 aa16.45■□□□□ 0.22
SHANK2-209ENST00000445654 EPC2Q52LR7 807 aa16.45■□□□□ 0.22
SHANK2-209ENST00000445654 FAM117BQ6P1L5 589 aa16.45■□□□□ 0.22
SHANK2-209ENST00000445654 SUGP1Q8IWZ8 645 aaKnown RBP16.45■□□□□ 0.22
SHANK2-209ENST00000445654 IFNL3Q8IZI9 196 aa16.45■□□□□ 0.22
SHANK2-209ENST00000445654 CHMP4BQ9H444 224 aaKnown RBP16.45■□□□□ 0.22
SHANK2-209ENST00000445654 EPB41L4AQ9HCS5 686 aaPredicted RBP16.45■□□□□ 0.22
SHANK2-209ENST00000445654 CLDND1Q9NY35 253 aa16.45■□□□□ 0.22
SHANK2-209ENST00000445654 ZNF318Q5VUA4 2279 aa16.44■□□□□ 0.22
SHANK2-209ENST00000445654 COL4A6Q14031 1691 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms