RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 STAG2Q8N3U4 1231 aa8.78□□□□□ -1
RIF1-205ENST00000444746 MSANTD4Q8NCY6 345 aa8.78□□□□□ -1
RIF1-205ENST00000444746 SMC6Q96SB8 1091 aa8.78□□□□□ -1
RIF1-205ENST00000444746 THAP12O43422 761 aa8.78□□□□□ -1
RIF1-205ENST00000444746 SH3BP5O60239 455 aa8.78□□□□□ -1
RIF1-205ENST00000444746 PPP2R5AQ15172 486 aa8.78□□□□□ -1
RIF1-205ENST00000444746 CFAP221Q4G0U5 840 aa8.78□□□□□ -1
RIF1-205ENST00000444746 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
RIF1-205ENST00000444746 OSBPL3Q9H4L5 887 aa8.78□□□□□ -1
RIF1-205ENST00000444746 KRT81Q14533 505 aa8.77□□□□□ -1
RIF1-205ENST00000444746 TOGARAM2Q6ZUX3 1019 aa8.77□□□□□ -1
RIF1-205ENST00000444746 PCDHB4Q9Y5E5 795 aa8.77□□□□□ -1
RIF1-205ENST00000444746 TTLL1O95922 423 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 SEPT2Q15019 361 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 ANKS4BQ8N8V4 417 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 MINPP1Q9UNW1 487 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 EPN1Q9Y6I3 576 aaPredicted RBP8.77□□□□□ -1.01
RIF1-205ENST00000444746 EFCAB6Q5THR3 1501 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 AATKQ6ZMQ8 1374 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 SRGAP2CP0DJJ0 459 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 ITIH3Q06033 890 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 STOX1Q6ZVD7 989 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 OTUD6AQ7L8S5 288 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 NME8Q8N427 588 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 ABCF3Q9NUQ8 709 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 POC1B-GALNT4F8VUJ3 575 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 RXRBP28702 533 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 EXOC3L4Q17RC7 722 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 SYDE2Q5VT97 1194 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 GBP6Q6ZN66 633 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 C7orf31Q8N865 590 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 NT5C3AQ9H0P0 336 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 UBE2TQ9NPD8 197 aaPredicted RBP8.77□□□□□ -1.01
RIF1-205ENST00000444746 INPP5FQ9Y2H2 1132 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 CCDC89Q8N998 374 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 RAB3IL1Q8TBN0 382 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 ARHGEF2Q92974 986 aaKnown RBP8.77□□□□□ -1.01
RIF1-205ENST00000444746 ZNF341Q9BYN7 854 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 TRPC5Q9UL62 973 aaPredicted RBP8.77□□□□□ -1.01
RIF1-205ENST00000444746 ADGRL3Q9HAR2 1447 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 UBE2Q2LH0YL09 131 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 ATP2A2P16615 1042 aaKnown RBP8.77□□□□□ -1.01
RIF1-205ENST00000444746 PFDN4Q9NQP4 134 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 FAM184BQ9ULE4 1060 aa8.77□□□□□ -1.01
RIF1-205ENST00000444746 KDM5AP29375 1690 aaKnown RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 SYNMO15061 1565 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 INO80B-WBP1J3KQ70 363 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 HNRNPDLO14979 420 aaKnown RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 IVLP07476 585 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 GKAP1Q5VSY0 366 aaPredicted RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 P2RX5Q93086 422 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 CEP170P1Q96L14 293 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 INO80BQ9C086 356 aaPredicted RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 G3BP2Q9UN86 482 aaKnown RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 NCK2O43639 380 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 GRAPQ13588 217 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 GRAPLQ8TC17 118 aaPredicted RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 ERBB4Q15303 1308 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 BMP3P12645 472 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 FOXO4P98177 505 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 EN1Q05925 392 aaPredicted RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 MKRN4PQ13434 485 aaPredicted RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 SETDB1Q15047 1291 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 MAP7D1Q3KQU3 841 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 AMNQ9BXJ7 453 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 RAB20Q9NX57 234 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 ABCB11O95342 1321 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 FRMD3A2A2Y4 597 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 EIF4A3P38919 411 aaKnown RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 CUL4AQ13619 759 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 RSAD2Q8WXG1 361 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 FIS1Q9Y3D6 152 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 STAM2O75886 525 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 PDE6CP51160 858 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 NLGN1Q8N2Q7 840 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 AS3MTQ9HBK9 375 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 TMEM191BP0C7N4 346 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 TPD52P55327 224 aaPredicted RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 CCDC144BQ3MJ40 725 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 DPP9Q86TI2 863 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 RFX6Q8HWS3 928 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 PASD1Q8IV76 773 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 PALM2Q8IXS6 379 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 CCDC13Q8IYE1 715 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 STMN4Q9H169 189 aaPredicted RBP8.76□□□□□ -1.01
RIF1-205ENST00000444746 KMT5AQ9NQR1 393 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 TBK1Q9UHD2 729 aa8.76□□□□□ -1.01
RIF1-205ENST00000444746 ACTN4O43707 911 aaKnown RBP8.75□□□□□ -1.01
RIF1-205ENST00000444746 LONP1P36776 959 aaKnown RBP8.75□□□□□ -1.01
RIF1-205ENST00000444746 CRKP46108 304 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 IRX4P78413 519 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 ZDHHC9Q9Y397 364 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 ATP7BP35670 1465 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 PLXNC1O60486 1568 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 CYP19A1P11511 503 aaPredicted RBP8.75□□□□□ -1.01
RIF1-205ENST00000444746 POTEDQ86YR6 584 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 SERPINB13Q9UIV8 391 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 KDM3AQ9Y4C1 1321 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 MAD1L1Q9Y6D9 718 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 BZW2Q9Y6E2 419 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms