RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ASIC1P78348 528 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 TPD52L1Q16890 204 aaPredicted RBP14.79□□□□□ -0.04
CPSF4-206ENST00000441580 Q4G0T1 1027 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 COBLL1Q53SF7 1204 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 HYIQ5T013 277 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 CDKAL1Q5VV42 579 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 KLHL10Q6JEL2 608 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 CNNM4Q6P4Q7 775 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 MIGA2Q7L4E1 593 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 FILIP1Q7Z7B0 1213 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 VSTM4Q8IW00 320 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 ERMNQ8TAM6 284 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 LARP4BQ92615 738 aaKnown RBP14.79□□□□□ -0.04
CPSF4-206ENST00000441580 MMTAG2Q9BU76 263 aaKnown RBP14.79□□□□□ -0.04
CPSF4-206ENST00000441580 ZNF341Q9BYN7 854 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 TRIM9Q9C026 710 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 KIAA1683Q9H0B3 1180 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 NRBP1Q9UHY1 535 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 CNOT7Q9UIV1 285 aaKnown RBP14.79□□□□□ -0.04
CPSF4-206ENST00000441580 PYCARDQ9ULZ3 195 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 RABGAP1Q9Y3P9 1069 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 GJA3Q9Y6H8 435 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 SHTN1A0MZ66 631 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 POTEMA6NI47 508 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 PHF20L1A8MW92 1017 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 H7C1D1 291 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 EDIL3O43854 480 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 CYP3A4P08684 503 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 CD44P16070 742 aaKnown RBP14.78□□□□□ -0.04
CPSF4-206ENST00000441580 KCNJ6P48051 423 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 USP14P54578 494 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 GRB10Q13322 594 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 NOLC1Q14978 699 aaKnown RBP eCLIP14.78□□□□□ -0.04
CPSF4-206ENST00000441580 KMT5BQ4FZB7 885 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 SV2BQ7L1I2 683 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 LRRC8AQ8IWT6 810 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 NOC3LQ8WTT2 800 aaKnown RBP14.78□□□□□ -0.04
CPSF4-206ENST00000441580 CACTINQ8WUQ7 758 aaKnown RBP14.78□□□□□ -0.04
CPSF4-206ENST00000441580 RAD54LQ92698 747 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 STAMQ92783 540 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 UPF1Q92900 1129 aaKnown RBP eCLIP14.78□□□□□ -0.04
CPSF4-206ENST00000441580 HACL1Q9UJ83 578 aa14.78□□□□□ -0.04
CPSF4-206ENST00000441580 BICDL2A1A5D9 508 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 GCOM1H8Y6P7 765 aaPredicted RBP14.77□□□□□ -0.05
CPSF4-206ENST00000441580 KLRC4O43908 158 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 POLR2MP0CAP2 368 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 TBC1D10BQ4KMP7 808 aaPredicted RBP14.77□□□□□ -0.05
CPSF4-206ENST00000441580 FILIP1LQ4L180 1135 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 ADSSL1Q8N142 457 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 GIMAP8Q8ND71 665 aaPredicted RBP14.77□□□□□ -0.05
CPSF4-206ENST00000441580 NLGN2Q8NFZ4 835 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 NELFBQ8WX92 580 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 HAS1Q92839 578 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 KIFC2Q96AC6 838 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 FAM20AQ96MK3 541 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 DEFB129Q9H1M3 183 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 AS3MTQ9HBK9 375 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 PCDHA12Q9UN75 941 aa14.77□□□□□ -0.05
CPSF4-206ENST00000441580 PARP14Q460N5 1801 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 A0A1B0GTH6 734 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 PVALEFA0A1B0GWK0 134 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 PSDA5PKW4 1024 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-206ENST00000441580 OPLAHO14841 1288 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 FDX1P10109 184 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 LMNB1P20700 586 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 CCZ1BP86790 482 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 CCZ1P86791 482 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-206ENST00000441580 SETQ01105 290 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-206ENST00000441580 LRMPQ12912 555 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 ZYXQ15942 572 aaKnown RBP14.76□□□□□ -0.05
CPSF4-206ENST00000441580 KIAA1755Q5JYT7 1200 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 UNC13DQ70J99 1090 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 SMYD4Q8IYR2 804 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-206ENST00000441580 GPC2Q8N158 579 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 KCTD17Q8N5Z5 321 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 SAMD3Q8N6K7 520 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 ETNPPLQ8TBG4 499 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 DHTKD1Q96HY7 919 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-206ENST00000441580 PNMA5Q96PV4 448 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 SLF1Q9BQI6 1058 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 BLOC1S4Q9NUP1 217 aa14.76□□□□□ -0.05
CPSF4-206ENST00000441580 PITPNM2Q9BZ72 1349 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 EGFRP00533 1210 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 ICAM1P05362 532 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 CCT6AP40227 531 aaKnown RBP14.75□□□□□ -0.05
CPSF4-206ENST00000441580 TERF1P54274 439 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 SNAP25P60880 206 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 PDE4DQ08499 809 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 CCDC174Q6PII3 467 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 SAMD7Q7Z3H4 446 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 SCYL3Q8IZE3 742 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 LRRC15Q8TF66 581 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 MED15Q96RN5 788 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 PLIN2Q99541 437 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 SPON1Q9HCB6 807 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 KCND1Q9NSA2 647 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 GPRC5DQ9NZD1 345 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 GDAQ9Y2T3 454 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 PAPPA2Q9BXP8 1791 aa14.75□□□□□ -0.05
CPSF4-206ENST00000441580 LOXHD1Q8IVV2 1947 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms