RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SSBP05455 408 aaKnown RBP eCLIP22.48■■□□□ 1.19
SHOX2-203ENST00000441443 ERFEQ4G0M1 354 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 MIIPQ5JXC2 388 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 PTF1AQ7RTS3 328 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 PIK3R5Q8WYR1 880 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 A1CFQ9NQ94 594 aaKnown RBP22.48■■□□□ 1.19
SHOX2-203ENST00000441443 SCP2P22307 547 aa22.47■■□□□ 1.19
SHOX2-203ENST00000441443 RNASE9P60153 205 aaKnown RBP22.47■■□□□ 1.19
SHOX2-203ENST00000441443 IFT20Q8IY31 132 aa22.47■■□□□ 1.19
SHOX2-203ENST00000441443 TLR10Q9BXR5 811 aa22.47■■□□□ 1.19
SHOX2-203ENST00000441443 ERCC3P19447 782 aa22.47■■□□□ 1.19
SHOX2-203ENST00000441443 MDH1P40925 334 aaKnown RBP22.47■■□□□ 1.19
SHOX2-203ENST00000441443 NTSR2O95665 410 aa22.47■■□□□ 1.19
SHOX2-203ENST00000441443 SRBD1Q8N5C6 995 aaKnown RBP22.47■■□□□ 1.19
SHOX2-203ENST00000441443 GIMAP8Q8ND71 665 aaPredicted RBP22.47■■□□□ 1.19
SHOX2-203ENST00000441443 RASGRP4Q8TDF6 673 aa22.47■■□□□ 1.19
SHOX2-203ENST00000441443 GNAT2P19087 354 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 TROAPQ12815 778 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 SLC4A8Q2Y0W8 1093 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 MTMR8Q96EF0 704 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 SLC40A1Q9NP59 571 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 SLIT2O94813 1529 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 LONP1P36776 959 aaKnown RBP22.46■■□□□ 1.19
SHOX2-203ENST00000441443 NEDD9Q14511 834 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 PPP2R5BQ15173 497 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 TMC4Q7Z404 712 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 MAATS1Q7Z4T9 603 aa22.46■■□□□ 1.19
SHOX2-203ENST00000441443 YTHDF3Q7Z739 585 aaKnown RBP22.46■■□□□ 1.19
SHOX2-203ENST00000441443 MAGEA1P43355 309 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 SMTNP53814 917 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 RASSF7Q02833 373 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 PARP10Q53GL7 1025 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 CEP57Q86XR8 500 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 LRRC15Q8TF66 581 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 PLAGL2Q9UPG8 496 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 RASSF9O75901 435 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 CEP85LQ5SZL2 805 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 ADGRA1Q86SQ6 560 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 C4orf32Q8N8J7 132 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 N4BP2L2Q92802 583 aaPredicted RBP22.45■■□□□ 1.18
SHOX2-203ENST00000441443 ATP6V1G3Q96LB4 118 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 MTA3Q9BTC8 594 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 NHSL1Q5SYE7 1610 aa22.45■■□□□ 1.18
SHOX2-203ENST00000441443 RHOBTB3O94955 611 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 TNFRSF8P28908 595 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 CDK17Q00537 523 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 KCNB1Q14721 858 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 KCTD19Q17RG1 926 aaPredicted RBP22.44■■□□□ 1.18
SHOX2-203ENST00000441443 CCDC178Q5BJE1 867 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 TMTC3Q6ZXV5 915 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 P2RX5Q93086 422 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 HPS3Q969F9 1004 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 MCM8Q9UJA3 840 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.44■■□□□ 1.18
SHOX2-203ENST00000441443 SPRED3Q2MJR0 410 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 KLHDC7AQ5VTJ3 777 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 CCDC114Q96M63 670 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 MMRN2Q9H8L6 949 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 GDF3Q9NR23 364 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 TIAM2Q8IVF5 1701 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 CNTNAP5Q8WYK1 1306 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 BACH1O14867 736 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 PDHBP11177 359 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 FCER1AP12319 257 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 ELF1P32519 619 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 GFPT1Q06210 699 aaPredicted RBP22.44■■□□□ 1.18
SHOX2-203ENST00000441443 STK4Q13043 487 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 PAK2Q13177 524 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 KRT12Q99456 494 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 PAGR1Q9BTK6 254 aa22.44■■□□□ 1.18
SHOX2-203ENST00000441443 NMT2O60551 498 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 FAM107AO95990 144 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 UBA7P41226 1012 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 CDR1P51861 262 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 CFAP221Q4G0U5 840 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 RRAGAQ7L523 313 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 CASKIN2Q8WXE0 1202 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 PNPLA7Q6ZV29 1317 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 KIF1CO43896 1103 aaKnown RBP22.43■■□□□ 1.18
SHOX2-203ENST00000441443 PDE4DQ08499 809 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 ITGB3BPQ13352 177 aaPredicted RBP22.43■■□□□ 1.18
SHOX2-203ENST00000441443 PREPLQ4J6C6 727 aaPredicted RBP22.43■■□□□ 1.18
SHOX2-203ENST00000441443 NOC3LQ8WTT2 800 aaKnown RBP22.43■■□□□ 1.18
SHOX2-203ENST00000441443 C8orf37Q96NL8 207 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 RBM28Q9NW13 759 aaKnown RBP22.43■■□□□ 1.18
SHOX2-203ENST00000441443 ODF2LQ9ULJ1 636 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 MYH3P11055 1940 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 MYH2Q9UKX2 1941 aa22.43■■□□□ 1.18
SHOX2-203ENST00000441443 FAM205AQ6ZU69 1335 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 ECM2O94769 699 aaPredicted RBP22.42■■□□□ 1.18
SHOX2-203ENST00000441443 SCG2P13521 617 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 CCNE1P24864 410 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 NF2P35240 595 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 TRAPPC10P48553 1259 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 DTHD1Q6ZMT9 781 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 CYFIP2Q96F07 1278 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 DHTKD1Q96HY7 919 aaPredicted RBP22.42■■□□□ 1.18
SHOX2-203ENST00000441443 ERGIC2Q96RQ1 377 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 TMEM60Q9H2L4 133 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 PLAAQ9Y263 795 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms