RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 WDR59Q6PJI9 974 aa18.6■□□□□ 0.57
PMS1-213ENST00000441310 TMEM87BQ96K49 555 aa18.6■□□□□ 0.57
PMS1-213ENST00000441310 AATFQ9NY61 560 aaKnown RBP eCLIP18.6■□□□□ 0.57
PMS1-213ENST00000441310 BAZ2BQ9UIF8 2168 aaKnown RBP18.6■□□□□ 0.57
PMS1-213ENST00000441310 NR5A1Q13285 461 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 DRP2Q13474 957 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 ANKRD20A8PQ5CZ79 823 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 HAUS3Q68CZ6 603 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 VPS54Q9P1Q0 977 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 MYO1EQ12965 1108 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 SAFBQ15424 915 aaKnown RBP eCLIP18.59■□□□□ 0.57
PMS1-213ENST00000441310 GRIPAP1Q4V328 841 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 C8orf74Q6P047 294 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 MAATS1Q7Z4T9 603 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 PARD3BQ8TEW8 1205 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 ANKIB1Q9P2G1 1089 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 SNX12Q9UMY4 172 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 ZSCAN5CA6NGD5 496 aaPredicted RBP18.59■□□□□ 0.57
PMS1-213ENST00000441310 BUB1BO60566 1050 aaPredicted RBP18.59■□□□□ 0.57
PMS1-213ENST00000441310 VAV2P52735 878 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 WTAPQ15007 396 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 TCP11X2Q5H9J9 407 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 NFRKBQ6P4R8 1299 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 ZBTB10Q96DT7 871 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 LRRC4BQ9NT99 713 aa18.59■□□□□ 0.57
PMS1-213ENST00000441310 ANO9A1A5B4 782 aa18.58■□□□□ 0.57
PMS1-213ENST00000441310 AP1G2O75843 785 aa18.58■□□□□ 0.57
PMS1-213ENST00000441310 HIBADHP31937 336 aaKnown RBP18.58■□□□□ 0.57
PMS1-213ENST00000441310 SCTRP47872 440 aa18.58■□□□□ 0.57
PMS1-213ENST00000441310 CARSP49589 748 aaKnown RBP18.58■□□□□ 0.57
PMS1-213ENST00000441310 QPCTQ16769 361 aa18.58■□□□□ 0.57
PMS1-213ENST00000441310 TRAPPC3LQ5T215 181 aa18.58■□□□□ 0.57
PMS1-213ENST00000441310 STAMBPL1Q96FJ0 436 aa18.58■□□□□ 0.57
PMS1-213ENST00000441310 GJD4Q96KN9 370 aaPredicted RBP18.58■□□□□ 0.57
PMS1-213ENST00000441310 ZNF804BA4D1E1 1349 aa18.58■□□□□ 0.56
PMS1-213ENST00000441310 LRP5O75197 1615 aa18.58■□□□□ 0.56
PMS1-213ENST00000441310 NSMCE1Q8WV22 266 aa18.58■□□□□ 0.56
PMS1-213ENST00000441310 LMBR1Q8WVP7 490 aa18.58■□□□□ 0.56
PMS1-213ENST00000441310 CAVIN3Q969G5 261 aa18.58■□□□□ 0.56
PMS1-213ENST00000441310 KRT23Q9C075 422 aa18.58■□□□□ 0.56
PMS1-213ENST00000441310 KCNB1Q14721 858 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 UBAC1Q9BSL1 405 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 SRPRBQ9Y5M8 271 aaKnown RBP18.57■□□□□ 0.56
PMS1-213ENST00000441310 ERICH2A1L162 156 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 GNAT2P19087 354 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 CYLC1P35663 651 aaPredicted RBP18.57■□□□□ 0.56
PMS1-213ENST00000441310 SF3A3Q12874 501 aaKnown RBP eCLIP18.57■□□□□ 0.562e-6■■■■□ 23.8
PMS1-213ENST00000441310 NFIXQ14938 502 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 NTRK3Q16288 839 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 SLC10A5Q5PT55 438 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 SEPT12Q8IYM1 358 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 IQCKQ8N0W5 287 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 ATP6V1G3Q96LB4 118 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 USP17L12C9JPN9 530 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 USP17L21D6R901 530 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 MECOMQ03112 1051 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 KIF5AQ12840 1032 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 CCDC96Q2M329 555 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 MSL1Q68DK7 614 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 GPIHBP1Q8IV16 184 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 MAGEC3Q8TD91 643 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 RIOK1Q9BRS2 568 aaKnown RBP18.57■□□□□ 0.56
PMS1-213ENST00000441310 CAPN6Q9Y6Q1 641 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 AFF2P51816 1311 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 PNPLA7Q6ZV29 1317 aa18.57■□□□□ 0.56
PMS1-213ENST00000441310 SSRP1Q08945 709 aaKnown RBP18.56■□□□□ 0.56
PMS1-213ENST00000441310 RC3H1Q5TC82 1133 aaKnown RBP18.56■□□□□ 0.56
PMS1-213ENST00000441310 NOC3LQ8WTT2 800 aaKnown RBP18.56■□□□□ 0.56
PMS1-213ENST00000441310 SH3GL3Q99963 347 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 MLXIPQ9HAP2 919 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 NOD2Q9HC29 1040 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 LRWD1Q9UFC0 647 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 SLC8A3P57103 927 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 SPAG1Q07617 926 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 SEMA3FQ13275 785 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 HIBCHQ6NVY1 386 aaPredicted RBP18.56■□□□□ 0.56
PMS1-213ENST00000441310 KRT26Q7Z3Y9 468 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 WDR19Q8NEZ3 1342 aa18.56■□□□□ 0.56
PMS1-213ENST00000441310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.55■□□□□ 0.56
PMS1-213ENST00000441310 LRRC10BA6NIK2 292 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 RILPL1Q5EBL4 403 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 FBXO33Q7Z6M2 555 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 NELFBQ8WX92 580 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 NHEJ1Q9H9Q4 299 aaPredicted RBP18.55■□□□□ 0.56
PMS1-213ENST00000441310 EPB41L5Q9HCM4 733 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 CABP5Q9NP86 173 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 RBM12Q9NTZ6 932 aaKnown RBP18.55■□□□□ 0.56
PMS1-213ENST00000441310 AGPAT5Q9NUQ2 364 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 GGA2Q9UJY4 613 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 LEMD3Q9Y2U8 911 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 GMNCA6NCL1 334 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 NCK2O43639 380 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 CYP2D6P10635 497 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 TMOD1P28289 359 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 DNA2P51530 1060 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 ADCY2Q08462 1091 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 ITGB3BPQ13352 177 aaPredicted RBP18.55■□□□□ 0.56
PMS1-213ENST00000441310 PPP1R7Q15435 360 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms