RNA–Protein interactions for RNA: ENST00000439040.5

ATP13A3-203, Transcript of ATPase 13A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATP13A3, Length 7,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-203ENST00000439040 CHKAP35790 457 aa4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 APBA1Q02410 837 aa4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 ASPHQ12797 758 aa4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 ZFYVE19Q96K21 471 aa4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 LBHD1Q9BQE6 289 aaPredicted RBP4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 LLPHQ9BRT6 129 aaKnown RBP4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 TRIM8Q9BZR9 551 aa4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 PRDM5Q9NQX1 630 aaPredicted RBP4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 TXLNGQ9NUQ3 528 aa4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 MAD1L1Q9Y6D9 718 aa4.28□□□□□ -1.72
ATP13A3-203ENST00000439040 RTEL1-TNFRSF6BF6WH68 1400 aa4.28□□□□□ -1.73
ATP13A3-203ENST00000439040 WDR91A4D1P6 747 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 POTEFA5A3E0 1075 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 MEFVO15553 781 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 OLR1P78380 273 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 DAB2P98082 770 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 PDE4DQ08499 809 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 FOXR1Q6PIV2 292 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 ZNF579Q8NAF0 562 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 C3orf20Q8ND61 904 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 GIPC2Q8TF65 315 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 CCDC51Q96ER9 411 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 UBE2OQ9C0C9 1292 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 HOMER3Q9NSC5 361 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SCHIP1Q9P0W5 487 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 NDUFB9Q9Y6M9 179 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 ATP1A3P13637 1013 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 EVA1CP58658 441 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 RBM6P78332 1123 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 MRPS35P82673 323 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 RASSF7Q02833 373 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 IFIT1BQ5T764 474 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 PEX5LQ8IYB4 626 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 FAM81AQ8TBF8 368 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SUN5Q8TC36 379 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 CCDC138Q96M89 665 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 TUBA8Q9NY65 449 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SOS1Q07889 1333 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 POLR3AO14802 1390 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 XPOTO43592 962 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SPOPO43791 374 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 LARGE1O95461 756 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 GAS8O95995 478 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 MYCLP12524 364 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 PLCD1P51178 756 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 GEN1Q17RS7 908 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SH3BP5LQ7L8J4 393 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 DDX42Q86XP3 938 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SMYD4Q8IYR2 804 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 WDR24Q96S15 920 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 LSM14BQ9BX40 385 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SUGCTQ9HAC7 445 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 PAG1Q9NWQ8 432 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 RGL1Q9NZL6 768 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 HDAC6Q9UBN7 1215 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 ATPIF1Q9UII2 106 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 GMNCA6NCL1 334 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 GUCY1B2O75343 617 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 MMEP08473 750 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 PTGS2P35354 604 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 VSNL1P62760 191 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 PUDPQ08623 228 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 TUBA3CQ13748 450 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SEPT2Q15019 361 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SLC9C1Q4G0N8 1177 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 THOC7Q6I9Y2 204 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 VSTM4Q8IW00 320 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 NME8Q8N427 588 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 ANKRD13CQ8N6S4 541 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 IQUBQ8NA54 791 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 OR8K1Q8NGG5 319 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 FERMT2Q96AC1 680 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 KLHL25Q9H0H3 589 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SLC38A10Q9HBR0 1119 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 NLRC4Q9NPP4 1024 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 LRWD1Q9UFC0 647 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SNAPC4Q5SXM2 1469 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 EIF3HO15372 352 aaKnown RBP eCLIP4.27□□□□□ -1.732e-6■□□□□ 9.5
ATP13A3-203ENST00000439040 IRX4P78413 519 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 ZCCHC8Q6NZY4 707 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 ARMCX5Q6P1M9 558 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 NEK5Q6P3R8 708 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 ZNF574Q6ZN55 896 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 TXNDC2Q86VQ3 553 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 UBL4BQ8N7F7 174 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 LRRC8CQ8TDW0 803 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 HDAC2Q92769 488 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 MKNK2Q9HBH9 465 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 HPS4Q9NQG7 708 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 TBK1Q9UHD2 729 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 PNMA6EA0A0J9YXQ4 647 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 TAF4O00268 1085 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 CHGBP05060 677 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SFMBT2Q5VUG0 894 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SPATA21Q7Z572 469 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 SH2D3CQ8N5H7 860 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 VPS39Q96JC1 886 aa4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATP13A3-203ENST00000439040 PAPOLBQ9NRJ5 636 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms