RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 RPTORQ8N122 1335 aa21.04■□□□□ 0.96
HDAC6-208ENST00000438518 CCDC194A0A1B0GVG4 234 aa21.03■□□□□ 0.96
HDAC6-208ENST00000438518 VPS37CA5D8V6 355 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-208ENST00000438518 ASB14A6NK59 587 aa21.03■□□□□ 0.96
HDAC6-208ENST00000438518 U2AF2P26368 475 aaKnown RBP eCLIP21.03■□□□□ 0.96
HDAC6-208ENST00000438518 FOSBP53539 338 aa21.03■□□□□ 0.96
HDAC6-208ENST00000438518 GUCY1B3Q02153 619 aa21.03■□□□□ 0.96
HDAC6-208ENST00000438518 XRRA1Q6P2D8 792 aa21.03■□□□□ 0.96
HDAC6-208ENST00000438518 ANO3Q9BYT9 981 aa21.03■□□□□ 0.96
HDAC6-208ENST00000438518 PXMP2Q9NR77 195 aa21.03■□□□□ 0.96
HDAC6-208ENST00000438518 COL20A1Q9P218 1284 aa21.03■□□□□ 0.96
HDAC6-208ENST00000438518 BIN2Q9UBW5 565 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-208ENST00000438518 LRRC37A2A6NM11 1700 aa21.03■□□□□ 0.96
HDAC6-208ENST00000438518 BTBD18B2RXH4 712 aa21.02■□□□□ 0.96
HDAC6-208ENST00000438518 COBLO75128 1261 aa21.02■□□□□ 0.96
HDAC6-208ENST00000438518 STAM2O75886 525 aa21.02■□□□□ 0.96
HDAC6-208ENST00000438518 PGK2P07205 417 aa21.02■□□□□ 0.96
HDAC6-208ENST00000438518 ALDH5A1P51649 535 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-208ENST00000438518 NONOQ15233 471 aaKnown RBP eCLIP21.02■□□□□ 0.96
HDAC6-208ENST00000438518 ARHGEF16Q5VV41 709 aa21.02■□□□□ 0.96
HDAC6-208ENST00000438518 OLFML2BQ68BL8 750 aa21.02■□□□□ 0.96
HDAC6-208ENST00000438518 MAMDC4Q6UXC1 1216 aa21.02■□□□□ 0.96
HDAC6-208ENST00000438518 FCHSD1Q86WN1 690 aa21.02■□□□□ 0.96
HDAC6-208ENST00000438518 TNFRSF25Q93038 417 aa21.02■□□□□ 0.96
HDAC6-208ENST00000438518 SOWAHBA6NEL2 793 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 SREBF1P36956 1147 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 FLT3LGP49771 235 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 PRKCZQ05513 592 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 JAKMIP3Q5VZ66 844 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 BRAPQ7Z569 592 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 NOSTRINQ8IVI9 506 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 MAML3Q96JK9 1138 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 TAAR1Q96RJ0 339 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 NAP1L4Q99733 375 aaKnown RBP21.01■□□□□ 0.95
HDAC6-208ENST00000438518 PDCD2LQ9BRP1 358 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 ZSCAN16Q9H4T2 348 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-208ENST00000438518 CIZ1Q9ULV3 898 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-208ENST00000438518 SYNGAP1Q96PV0 1343 aa21.01■□□□□ 0.95
HDAC6-208ENST00000438518 EDNRBP24530 442 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 NUCB2P80303 420 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 CNTN2Q02246 1040 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 NR5A1Q13285 461 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 OTOP1Q7RTM1 612 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 OXER1Q8TDS5 423 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 MORC4Q8TE76 937 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 PXYLP1Q8TE99 480 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 TMEM260Q9NX78 707 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 MTMR6Q9Y217 621 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 TRIM17Q9Y577 477 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 MYH7BA7E2Y1 1941 aa21■□□□□ 0.95
HDAC6-208ENST00000438518 CYP2B6P20813 491 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 CCND2P30279 289 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 DDIT3P35638 169 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 TRAPPC10P48553 1259 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 USP11P51784 963 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 LBX1P52954 281 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 PGM5Q15124 567 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 PCNX4Q63HM2 1172 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 MCTP1Q6DN14 999 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 NPLOC4Q8TAT6 608 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 RASGRP4Q8TDF6 673 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 FGD4Q96M96 766 aa20.99■□□□□ 0.95
HDAC6-208ENST00000438518 NOL7Q9UMY1 257 aaKnown RBP20.99■□□□□ 0.95
HDAC6-208ENST00000438518 MYH15Q9Y2K3 1946 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 ECM2O94769 699 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-208ENST00000438518 CYP3A4P08684 503 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 CAP1Q01518 475 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 STXBP2Q15833 593 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 PKN2Q16513 984 aaKnown RBP20.98■□□□□ 0.95
HDAC6-208ENST00000438518 MOXD1Q6UVY6 613 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 PIK3AP1Q6ZUJ8 805 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 RAET1EQ8TD07 263 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 TBCKQ8TEA7 893 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 CRYGNQ8WXF5 182 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 TINF2Q9BSI4 451 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 PRDM10Q9NQV6 1147 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 NRBP1Q9UHY1 535 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 GABRQQ9UN88 632 aa20.98■□□□□ 0.95
HDAC6-208ENST00000438518 NR3C2P08235 984 aa20.97■□□□□ 0.95
HDAC6-208ENST00000438518 ZSCAN22P10073 491 aaPredicted RBP20.97■□□□□ 0.95
HDAC6-208ENST00000438518 EIF2AK2P19525 551 aaKnown RBP20.97■□□□□ 0.95
HDAC6-208ENST00000438518 ARHGAP4P98171 946 aa20.97■□□□□ 0.95
HDAC6-208ENST00000438518 PDE4DQ08499 809 aa20.97■□□□□ 0.95
HDAC6-208ENST00000438518 ORC2Q13416 577 aaPredicted RBP20.97■□□□□ 0.95
HDAC6-208ENST00000438518 CTU1Q7Z7A3 348 aaKnown RBP20.97■□□□□ 0.95
HDAC6-208ENST00000438518 NEK8Q86SG6 692 aa20.97■□□□□ 0.95
HDAC6-208ENST00000438518 VSIG10LQ86VR7 867 aa20.97■□□□□ 0.95
HDAC6-208ENST00000438518 SLAIN1Q8ND83 568 aa20.97■□□□□ 0.95
HDAC6-208ENST00000438518 KIAA1217Q5T5P2 1943 aa20.97■□□□□ 0.95
HDAC6-208ENST00000438518 ASTN1O14525 1302 aa20.97■□□□□ 0.95
HDAC6-208ENST00000438518 ADAMTS3O15072 1205 aa20.96■□□□□ 0.95
HDAC6-208ENST00000438518 EIF3JO75822 258 aaKnown RBP20.96■□□□□ 0.95
HDAC6-208ENST00000438518 BRD1O95696 1058 aa20.96■□□□□ 0.95
HDAC6-208ENST00000438518 IGHA2P01877 340 aa20.96■□□□□ 0.95
HDAC6-208ENST00000438518 GCFC2P16383 781 aaKnown RBP20.96■□□□□ 0.95
HDAC6-208ENST00000438518 RILPL1Q5EBL4 403 aa20.96■□□□□ 0.95
HDAC6-208ENST00000438518 ARMCX2Q7L311 632 aa20.96■□□□□ 0.95
HDAC6-208ENST00000438518 PURBQ96QR8 312 aaKnown RBP20.96■□□□□ 0.95
HDAC6-208ENST00000438518 KIF28PB7ZC32 967 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 CIITAP33076 1130 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms