RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 MSL3Q8N5Y2 521 aaKnown RBP9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 MTMR8Q96EF0 704 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 PRO3102Q9H379 93 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 LY9Q9HBG7 655 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 GDPD2Q9HCC8 539 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 ZHX1Q9UKY1 873 aaPredicted RBP9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 COLQQ9Y215 455 aaPredicted RBP9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 CNPY2Q9Y2B0 182 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 SYNRGQ9UMZ2 1314 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 KLRF2D3W0D1 207 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 DNM1LO00429 736 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 SH2B2O14492 632 aaPredicted RBP9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 CTAGE5O15320 804 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 PRC1O43663 620 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 CYTH3O43739 400 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 NEFLP07196 543 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 AKR1A1P14550 325 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 ALDH5A1P51649 535 aaPredicted RBP9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 RPS6P62753 249 aaKnown RBP9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 WTAPQ15007 396 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 CCDC144BQ3MJ40 725 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 TMEM67Q5HYA8 995 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 MORC4Q8TE76 937 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 GLMNQ92990 594 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 MYL10Q9BUA6 226 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 LRRC2Q9BYS8 371 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 SENP6Q9GZR1 1112 aaPredicted RBP9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 ABHD16BQ9H3Z7 469 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 VAT1LQ9HCJ6 419 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 XPNPEP3Q9NQH7 507 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 PDGFCQ9NRA1 345 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 COL20A1Q9P218 1284 aa9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 ZMYND8Q9ULU4 1186 aaPredicted RBP9.96□□□□□ -0.82
HERPUD2-206ENST00000438224 SCN10AQ9Y5Y9 1956 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 PTPDC1A2A3K4 754 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 RARBP10826 455 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 SYN1P17600 705 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 CALML3P27482 149 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 ADCYAP1R1P41586 468 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 ADCK5Q3MIX3 580 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 PPP2R2DQ66LE6 453 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 CCSAPQ6IQ19 270 aaPredicted RBP9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 TAPT1Q6NXT6 567 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 EEPD1Q7L9B9 569 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 RAB11FIP4Q86YS3 637 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 FBXO16Q8IX29 292 aaPredicted RBP9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 ZNF654Q8IZM8 581 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 KLHDC9Q8NEP7 349 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 FERMT2Q96AC1 680 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 TCEANC2Q96MN5 208 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 PRM3Q9NNZ6 103 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 PHF24Q9UPV7 400 aa9.95□□□□□ -0.82
HERPUD2-206ENST00000438224 TRIP12Q14669 1992 aaPredicted RBP9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 POTEMA6NI47 508 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 ASB14A6NK59 587 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 KBTBD13C9JR72 458 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 MAP3K7O43318 606 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 DUSP11O75319 330 aaKnown RBP9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 BRD1O95696 1058 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 RXRAP19793 462 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 RTP1P59025 263 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 SNX17Q15036 470 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 HABP4Q5JVS0 413 aaKnown RBP9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 RNF207Q6ZRF8 634 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 METTL3Q86U44 580 aaKnown RBP9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 FBXO11Q86XK2 927 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 ARRDC4Q8NCT1 418 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 SYTL5Q8TDW5 730 aaPredicted RBP9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 PIGSQ96S52 555 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 EPAS1Q99814 870 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 UPF3AQ9H1J1 476 aaKnown RBP9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 RIOX1Q9H6W3 641 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 RBM27Q9P2N5 1060 aaKnown RBP9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 FAM184BQ9ULE4 1060 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 GNEQ9Y223 722 aaKnown RBP9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 USTQ9Y2C2 406 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 NR2E3Q9Y5X4 410 aa9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 LAMA2P24043 3122 aaKnown RBP9.94□□□□□ -0.82
HERPUD2-206ENST00000438224 ABCB11O95342 1321 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 A0A1W2PQ45 241 aaPredicted RBP9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 A0A1W2PQY0 241 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 ERICH2A1L162 156 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 DHX16O60231 1041 aaKnown RBP9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 PLEKHA8P1O95397 391 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 OATP04181 439 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 CPA1P15085 419 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 SMPD1P17405 629 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 EDNRBP24530 442 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 MCM5P33992 734 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 ABL2P42684 1182 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 GJA9P57773 515 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 BEX3Q00994 111 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 SART3Q15020 963 aaKnown RBP9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 SLC39A5Q6ZMH5 540 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 HOMER1Q86YM7 354 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 KCNB2Q92953 911 aa9.93□□□□□ -0.82
HERPUD2-206ENST00000438224 PBXIP1Q96AQ6 731 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms