RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 CDHR1Q96JP9 859 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 BRMS1Q9HCU9 246 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 PXMP2Q9NR77 195 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 PCDHA4Q9UN74 947 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 CCND2P30279 289 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 CCT2P78371 535 aaKnown RBP13.16□□□□□ -0.3
SNHG3-202ENST00000437681 GSE1Q14687 1217 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 USH1GQ495M9 461 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 TRIB2Q92519 343 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 CNPY2Q9Y2B0 182 aa13.16□□□□□ -0.3
SNHG3-202ENST00000437681 PTPDC1A2A3K4 754 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
SNHG3-202ENST00000437681 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 GIMAP8Q8ND71 665 aaPredicted RBP13.15□□□□□ -0.3
SNHG3-202ENST00000437681 CRISPLD2Q9H0B8 497 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 UPF3AQ9H1J1 476 aaKnown RBP13.15□□□□□ -0.3
SNHG3-202ENST00000437681 CPVLQ9H3G5 476 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 HMX1Q9NP08 348 aaPredicted RBP13.15□□□□□ -0.3
SNHG3-202ENST00000437681 ORC3Q9UBD5 711 aaPredicted RBP13.15□□□□□ -0.3
SNHG3-202ENST00000437681 SMCO2A6NFE2 343 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.3
SNHG3-202ENST00000437681 SEPT4O43236 478 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 STXBP2Q15833 593 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 NSMFQ6X4W1 530 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 SLC30A10Q6XR72 485 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
SNHG3-202ENST00000437681 EMID1Q96A84 441 aaPredicted RBP13.15□□□□□ -0.3
SNHG3-202ENST00000437681 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.15□□□□□ -0.3
SNHG3-202ENST00000437681 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNHG3-202ENST00000437681 M0R2N6 131 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 INHAP05111 366 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 CYP2B6P20813 491 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 SREBF1P36956 1147 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 USP11P51784 963 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 SNAP25P60880 206 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 VSIG10LQ86VR7 867 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
SNHG3-202ENST00000437681 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 SMCHD1A6NHR9 2005 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 SPDYE3A6NKU9 549 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 GJB1P08034 283 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 ZNF865P0CJ78 1059 aaPredicted RBP13.14□□□□□ -0.31
SNHG3-202ENST00000437681 AKR1A1P14550 325 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 PDCP20941 246 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 CST5P28325 142 aaPredicted RBP13.14□□□□□ -0.31
SNHG3-202ENST00000437681 PDE4DQ08499 809 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 TRIM29Q14134 588 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 CRYGNQ8WXF5 182 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 GPRASP2Q96D09 838 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 RMDN3Q96TC7 470 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 PDCD2LQ9BRP1 358 aa13.14□□□□□ -0.31
SNHG3-202ENST00000437681 TSEN34Q9BSV6 310 aaKnown RBP13.14□□□□□ -0.31
SNHG3-202ENST00000437681 KPNA6O60684 536 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 LARGE1O95461 756 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 SNAI1O95863 264 aaPredicted RBP13.13□□□□□ -0.31
SNHG3-202ENST00000437681 FDPSP14324 419 aaKnown RBP13.13□□□□□ -0.31
SNHG3-202ENST00000437681 CIITAP33076 1130 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 ARHGEF16Q5VV41 709 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
SNHG3-202ENST00000437681 HOMER2Q9NSB8 354 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
SNHG3-202ENST00000437681 ACVR2BQ13705 512 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 PGM5Q15124 567 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 GNPTABQ3T906 1256 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 NLRX1Q86UT6 975 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 HSCBQ8IWL3 235 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 SENP7Q9BQF6 1050 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 ALG1Q9BT22 464 aa13.13□□□□□ -0.31
SNHG3-202ENST00000437681 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNHG3-202ENST00000437681 CYP3A7-CYP3A51PA0A087WV96 503 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 DUSP11O75319 330 aaKnown RBP13.12□□□□□ -0.31
SNHG3-202ENST00000437681 CFBP00751 764 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
SNHG3-202ENST00000437681 CYP3A7P24462 503 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
SNHG3-202ENST00000437681 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 PHKBQ93100 1093 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
SNHG3-202ENST00000437681 FLRT1Q9NZU1 646 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 DDX20Q9UHI6 824 aaKnown RBP13.12□□□□□ -0.31
SNHG3-202ENST00000437681 OGDHLQ9ULD0 1010 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 PEX10O60683 326 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 NR3C2P08235 984 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 NLRP5P59047 1200 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 STK3Q13188 491 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 MBOAT7Q96N66 472 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
SNHG3-202ENST00000437681 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
SNHG3-202ENST00000437681 ASTN1O14525 1302 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 MMP1P03956 469 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms