RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 LTBP3Q9NS15 1303 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 A0A087WZG4 1122 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 ZBTB7AO95365 584 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 CD247P20963 164 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 PMS1P54277 932 aaKnown RBP3.48□□□□□ -1.85
CDC40-204ENST00000431461 POU4F1Q01851 419 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 TAGLNQ01995 201 aaKnown RBP3.48□□□□□ -1.85
CDC40-204ENST00000431461 CACNB2Q08289 660 aaPredicted RBP3.48□□□□□ -1.85
CDC40-204ENST00000431461 APOBRQ0VD83 1088 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 ICAM4Q14773 271 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 MCTP2Q6DN12 878 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 STK32CQ86UX6 486 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 TAB3Q8N5C8 712 aaPredicted RBP3.48□□□□□ -1.85
CDC40-204ENST00000431461 NETO2Q8NC67 525 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 BRF1Q92994 677 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 NKD1Q969G9 470 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 PEX11GQ96HA9 241 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 ADAMTS1Q9UHI8 967 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 SF3B6Q9Y3B4 125 aaKnown RBP3.48□□□□□ -1.85
CDC40-204ENST00000431461 TESMINQ9Y4I5 508 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 FHOD1Q9Y613 1164 aa3.48□□□□□ -1.85
CDC40-204ENST00000431461 SMARCA5O60264 1052 aaPredicted RBP3.47□□□□□ -1.85
CDC40-204ENST00000431461 TCF3P15923 654 aa3.47□□□□□ -1.85
CDC40-204ENST00000431461 ZNF76P36508 570 aa3.47□□□□□ -1.85
CDC40-204ENST00000431461 RBM10P98175 930 aaKnown RBP3.47□□□□□ -1.85
CDC40-204ENST00000431461 GNL2Q13823 731 aaKnown RBP3.47□□□□□ -1.85
CDC40-204ENST00000431461 AXDND1Q5T1B0 1012 aaPredicted RBP3.47□□□□□ -1.85
CDC40-204ENST00000431461 FIBCD1Q8N539 461 aa3.47□□□□□ -1.85
CDC40-204ENST00000431461 AMER2Q8N7J2 671 aa3.47□□□□□ -1.85
CDC40-204ENST00000431461 TMEM87AQ8NBN3 555 aa3.47□□□□□ -1.85
CDC40-204ENST00000431461 RNF34Q969K3 372 aa3.47□□□□□ -1.85
CDC40-204ENST00000431461 GGT7Q9UJ14 662 aa3.47□□□□□ -1.85
CDC40-204ENST00000431461 NUDT5Q9UKK9 219 aa3.47□□□□□ -1.85
CDC40-204ENST00000431461 DIS3Q9Y2L1 958 aaKnown RBP3.47□□□□□ -1.85
CDC40-204ENST00000431461 MROH6A6NGR9 719 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 IMPDH2P12268 514 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 IFNGR1P15260 489 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 FHL2Q14192 279 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 EEF1DP3Q658K8 133 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 DCAF15Q66K64 600 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 RCSD1Q6JBY9 416 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 PLEKHH3Q7Z736 793 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 CABP7Q86V35 215 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 PPFIBP1Q86W92 1011 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 LZTR1Q8N653 840 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 DNERQ8NFT8 737 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 TM9SF2Q99805 663 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 ZNF341Q9BYN7 854 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 CD248Q9HCU0 757 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 FAM86C1Q9NVL1 165 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 RWDD3Q9Y3V2 267 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 ZNF451Q9Y4E5 1061 aa3.46□□□□□ -1.86
CDC40-204ENST00000431461 PPP1R11O60927 126 aaPredicted RBP3.45□□□□□ -1.86
CDC40-204ENST00000431461 RECKO95980 971 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 ITGA4P13612 1032 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 RPL13P26373 211 aaKnown RBP3.45□□□□□ -1.86
CDC40-204ENST00000431461 KRTAP10-9P60411 292 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 COL9A2Q14055 689 aaPredicted RBP3.45□□□□□ -1.86
CDC40-204ENST00000431461 SPDYAQ5MJ70 313 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 ZNF654Q8IZM8 581 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 MTA3Q9BTC8 594 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 C11orf84Q9BUA3 381 aaPredicted RBP3.45□□□□□ -1.86
CDC40-204ENST00000431461 BACH2Q9BYV9 841 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 DEF6Q9H4E7 631 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 NOL6Q9H6R4 1146 aaKnown RBP3.45□□□□□ -1.86
CDC40-204ENST00000431461 FBLN5Q9UBX5 448 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 ZNRF3Q9ULT6 936 aa3.45□□□□□ -1.86
CDC40-204ENST00000431461 AURKAO14965 403 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 LAMTOR5O43504 91 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 CD3EP07766 207 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 SELENOPP49908 381 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 TCEAL1Q15170 157 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 LRCH2Q5VUJ6 765 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 C9orf131Q5VYM1 1079 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 TDRD10Q5VZ19 366 aaKnown RBP3.44□□□□□ -1.86
CDC40-204ENST00000431461 UNC5AQ6ZN44 842 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 KYQ8NBH2 561 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 RBBP8NLQ8NC74 664 aaPredicted RBP3.44□□□□□ -1.86
CDC40-204ENST00000431461 GORASP1Q9BQQ3 440 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 TGIF2Q9GZN2 237 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.44□□□□□ -1.86
CDC40-204ENST00000431461 SIT1Q9Y3P8 196 aa3.44□□□□□ -1.86
CDC40-204ENST00000431461 NPEPPSL1A6NEC2 478 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 C9orf118A6NHY6 69 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 NPIPB8E9PQR5 432 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 DDX3XO00571 662 aaKnown RBP eCLIP3.43□□□□□ -1.86
CDC40-204ENST00000431461 CBFA2T2O43439 604 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 TP53P04637 393 aaPredicted RBP3.43□□□□□ -1.86
CDC40-204ENST00000431461 C8BP07358 591 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 CYP2C8P10632 490 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 THBS2P35442 1172 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 FANCCQ00597 558 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 DPTQ07507 201 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 R3HDM1Q15032 1099 aaKnown RBP3.43□□□□□ -1.86
CDC40-204ENST00000431461 PRR31Q5SQ13 230 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 VPS37DQ86XT2 251 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 FAM26EQ8N5C1 309 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 TTLL6Q8N841 843 aa3.43□□□□□ -1.86
CDC40-204ENST00000431461 TXNDC5Q8NBS9 432 aaKnown RBP3.43□□□□□ -1.86
CDC40-204ENST00000431461 CHFRQ96EP1 664 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms