RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 TNS4Q8IZW8 715 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 DAGLBQ8NCG7 672 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 PDCD2LQ9BRP1 358 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 VTA1Q9NP79 307 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 PXMP2Q9NR77 195 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.16■□□□□ 0.34
GARNL3-204ENST00000429629 KIF3AQ9Y496 699 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.16■□□□□ 0.34
GARNL3-204ENST00000429629 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
GARNL3-204ENST00000429629 HTTP42858 3142 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 EIF3JO75822 258 aaKnown RBP17.15■□□□□ 0.34
GARNL3-204ENST00000429629 NR3C2P08235 984 aa17.15■□□□□ 0.34
GARNL3-204ENST00000429629 ZNF865P0CJ78 1059 aaPredicted RBP17.15■□□□□ 0.34
GARNL3-204ENST00000429629 HOXA13P31271 388 aaPredicted RBP17.15■□□□□ 0.34
GARNL3-204ENST00000429629 ACVR2BQ13705 512 aa17.15■□□□□ 0.34
GARNL3-204ENST00000429629 STXBP2Q15833 593 aa17.15■□□□□ 0.34
GARNL3-204ENST00000429629 ARHGEF16Q5VV41 709 aa17.15■□□□□ 0.34
GARNL3-204ENST00000429629 INTS4Q96HW7 963 aaKnown RBP17.15■□□□□ 0.34
GARNL3-204ENST00000429629 ABHD8Q96I13 439 aa17.15■□□□□ 0.34
GARNL3-204ENST00000429629 PURBQ96QR8 312 aaKnown RBP17.15■□□□□ 0.34
GARNL3-204ENST00000429629 KATNBL1Q9H079 304 aa17.15■□□□□ 0.34
GARNL3-204ENST00000429629 EHMT1Q9H9B1 1298 aa17.15■□□□□ 0.34
GARNL3-204ENST00000429629 PAK6Q9NQU5 681 aaPredicted RBP17.15■□□□□ 0.34
GARNL3-204ENST00000429629 RBM47A0AV96 593 aaKnown RBP17.14■□□□□ 0.33
GARNL3-204ENST00000429629 SPDYE3A6NKU9 549 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 SEPT4O43236 478 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 GJB1P08034 283 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 NLRP5P59047 1200 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 PHF20Q9BVI0 1012 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 VPS54Q9P1Q0 977 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 PCDHA6Q9UN73 950 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 PCDHA4Q9UN74 947 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 PCDHA8Q9Y5H6 950 aa17.14■□□□□ 0.33
GARNL3-204ENST00000429629 K7ELQ4 463 aaPredicted RBP17.13■□□□□ 0.33
GARNL3-204ENST00000429629 JAK2O60674 1132 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 CCL5P13501 91 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 PDE4DQ08499 809 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 PCNX4Q63HM2 1172 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 IQSEC1Q6DN90 963 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 KCNV1Q6PIU1 500 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 FCHSD1Q86WN1 690 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 REXO1Q8N1G1 1221 aaKnown RBP17.13■□□□□ 0.33
GARNL3-204ENST00000429629 SHISA4Q96DD7 197 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 FAM184BQ9ULE4 1060 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 MGAMO43451 1857 aa17.13■□□□□ 0.33
GARNL3-204ENST00000429629 PLXNB2O15031 1838 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 M0R2N6 131 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 MAFGO15525 162 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 PPFIA3O75145 1194 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 TGFB3P10600 412 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 CCND2P30279 289 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 TRIM32Q13049 653 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 PGM5Q15124 567 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 NPY5RQ15761 445 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 BLIDQ8IZY5 108 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 TRPV1Q8NER1 839 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 TMEM106CQ9BVX2 250 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.12■□□□□ 0.33
GARNL3-204ENST00000429629 RNF208Q9H0X6 261 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 Q9Y3F1 56 aa17.12■□□□□ 0.33
GARNL3-204ENST00000429629 BAZ2BQ9UIF8 2168 aaKnown RBP17.11■□□□□ 0.33
GARNL3-204ENST00000429629 AKR1A1P14550 325 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 SREBF1P36956 1147 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 NKX3-2P78367 333 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 TRIM29Q14134 588 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 MTFR1Q15390 333 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 LHX8Q68G74 356 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 TAPT1Q6NXT6 567 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 FBXO18Q8NFZ0 1043 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 CRYGNQ8WXF5 182 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 AIFM3Q96NN9 605 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 CRISPLD2Q9H0B8 497 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 UNC93B1Q9H1C4 597 aa17.11■□□□□ 0.33
GARNL3-204ENST00000429629 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
GARNL3-204ENST00000429629 ZSWIM8A7E2V4 1837 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 DOCK3Q8IZD9 2030 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 NKRFO15226 690 aaKnown RBP eCLIP17.1■□□□□ 0.33
GARNL3-204ENST00000429629 SGPL1O95470 568 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 CYP3A4P08684 503 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
GARNL3-204ENST00000429629 GJA8P48165 433 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 USP11P51784 963 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 UBE2SQ16763 222 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 SCFD2Q8WU76 684 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 INPP4AQ96PE3 977 aaPredicted RBP17.1■□□□□ 0.33
GARNL3-204ENST00000429629 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
GARNL3-204ENST00000429629 DUSP11O75319 330 aaKnown RBP17.09■□□□□ 0.33
GARNL3-204ENST00000429629 MMP1P03956 469 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 PDIA4P13667 645 aaKnown RBP17.09■□□□□ 0.33
GARNL3-204ENST00000429629 CCND3P30281 292 aaPredicted RBP17.09■□□□□ 0.33
GARNL3-204ENST00000429629 ICAM3P32942 547 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 MRPS9P82933 396 aaKnown RBP17.09■□□□□ 0.33
GARNL3-204ENST00000429629 CCDC144BQ3MJ40 725 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 KRT25Q7Z3Z0 450 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 HSCBQ8IWL3 235 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 CDHR1Q96JP9 859 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms