RNA–Protein interactions for RNA: ENST00000429534.1

SEC13P1-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component pseudogene 1, humanhuman

BASIC

Gene SEC13P1, Length 948 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P1-201ENST00000429534 STK3Q13188 491 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 RABEP1Q15276 862 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 STXBP2Q15833 593 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 CCDC144BQ3MJ40 725 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 WWC2Q6AWC2 1192 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 FAM177A1Q8N128 213 aaPredicted RBP12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 SMARCC2Q8TAQ2 1214 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 KIF2CQ99661 725 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 KATNBL1Q9H079 304 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 PXMP2Q9NR77 195 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 COL20A1Q9P218 1284 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 COL11A1P12107 1806 aaPredicted RBP12.74□□□□□ -0.37
SEC13P1-201ENST00000429534 MEIS2O14770 477 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 DUSP11O75319 330 aaKnown RBP12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 EIF3JO75822 258 aaKnown RBP12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 NR3C2P08235 984 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 TNFAIP2Q03169 654 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 MCTP2Q6DN12 878 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 XRRA1Q6P2D8 792 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 FCHSD1Q86WN1 690 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 PHKBQ93100 1093 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 SHISA4Q96DD7 197 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 ZSCAN31Q96LW9 406 aaPredicted RBP12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 TBC1D32Q96NH3 1257 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 SLC26A6Q9BXS9 759 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 RIC8AQ9NPQ8 531 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 XPNPEP3Q9NQH7 507 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 SH3GLB2Q9NR46 395 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 Q9Y3F1 56 aa12.73□□□□□ -0.37
SEC13P1-201ENST00000429534 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 ESYT2A0FGR8 921 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 SMCO2A6NFE2 343 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 STXBP3O00186 592 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 ST18O60284 1047 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 STAM2O75886 525 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 FARP2O94887 1054 aaPredicted RBP12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 DEXIO95424 95 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 FOSP01100 380 aaPredicted RBP12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 EIF2AK2P19525 551 aaKnown RBP12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 GNA11P29992 359 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 CCND2P30279 289 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 ADCY7P51828 1080 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 MLLT1Q03111 559 aaPredicted RBP12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 SCRN1Q12765 414 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 PKN1Q16512 942 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 TAPT1Q6NXT6 567 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 USP17L6PQ6QN14 398 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 EEPD1Q7L9B9 569 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 NECAB2Q7Z6G3 386 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 RNF180Q86T96 592 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 VSIG10LQ86VR7 867 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 SCFD2Q8WU76 684 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 GPKOWQ92917 476 aaPredicted RBP eCLIP12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 PDCD2LQ9BRP1 358 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 EHMT1Q9H9B1 1298 aa12.72□□□□□ -0.37
SEC13P1-201ENST00000429534 SPDYE3A6NKU9 549 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 DNM1LO00429 736 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 NKRFO15226 690 aaKnown RBP eCLIP12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 PGM5Q15124 567 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 ME3Q16798 604 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 KCNV1Q6PIU1 500 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 NOL8Q76FK4 1167 aaKnown RBP12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 UBE2Q1Q7Z7E8 422 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 FBXO16Q8IX29 292 aaPredicted RBP12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 CCDC148Q8NFR7 591 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 BICD2Q8TD16 824 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 WASF1Q92558 559 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 ZMYND12Q9H0C1 365 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 C6orf50Q9HD87 102 aa12.71□□□□□ -0.37
SEC13P1-201ENST00000429534 FRMPD4Q14CM0 1322 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 MYCLP12524 364 aaPredicted RBP12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 XBP1P17861 261 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 ADCYAP1R1P41586 468 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 MCM2P49736 904 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 GJA9P57773 515 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 NKX3-2P78367 333 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 LRRC41Q15345 812 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 DUSP28Q4G0W2 176 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 GTF3C6Q969F1 213 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 PAWRQ96IZ0 340 aaKnown RBP12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 TSEN34Q9BSV6 310 aaKnown RBP12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 HTATIP2Q9BUP3 242 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 PDGFCQ9NRA1 345 aa12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 SH2B1Q9NRF2 756 aaPredicted RBP12.7□□□□□ -0.38
SEC13P1-201ENST00000429534 STK36Q9NRP7 1315 aa12.69□□□□□ -0.38
SEC13P1-201ENST00000429534 PGK1P00558 417 aa12.69□□□□□ -0.38
SEC13P1-201ENST00000429534 TXNP10599 105 aaKnown RBP12.69□□□□□ -0.38
SEC13P1-201ENST00000429534 TGFB3P10600 412 aa12.69□□□□□ -0.38
SEC13P1-201ENST00000429534 SMPD1P17405 629 aa12.69□□□□□ -0.38
SEC13P1-201ENST00000429534 CST5P28325 142 aaPredicted RBP12.69□□□□□ -0.38
SEC13P1-201ENST00000429534 AP3B2Q13367 1082 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms