RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 TUBB2BQ9BVA1 445 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 SLC39A2Q9NP94 309 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 EXOC1Q9NV70 894 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 ATP2C1P98194 919 aaPredicted RBP16.59■□□□□ 0.25
CACTIN-203ENST00000429344 TRIM14Q14142 442 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 TMEM47Q9BQJ4 181 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 H7C1D1 291 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 POLRMTO00411 1230 aaKnown RBP16.59■□□□□ 0.25
CACTIN-203ENST00000429344 COG1Q8WTW3 980 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 EBAG9O00559 213 aa16.58■□□□□ 0.25
CACTIN-203ENST00000429344 SYF2O95926 243 aaKnown RBP16.58■□□□□ 0.25
CACTIN-203ENST00000429344 SF3B2Q13435 895 aaKnown RBP16.58■□□□□ 0.25
CACTIN-203ENST00000429344 NFRKBQ6P4R8 1299 aa16.58■□□□□ 0.25
CACTIN-203ENST00000429344 SH3RF1Q7Z6J0 888 aa16.58■□□□□ 0.25
CACTIN-203ENST00000429344 BLIDQ8IZY5 108 aa16.58■□□□□ 0.25
CACTIN-203ENST00000429344 CNOT6LQ96LI5 555 aaKnown RBP16.58■□□□□ 0.25
CACTIN-203ENST00000429344 LRRC1Q9BTT6 524 aa16.58■□□□□ 0.25
CACTIN-203ENST00000429344 IFIH1Q9BYX4 1025 aaKnown RBP16.58■□□□□ 0.25
CACTIN-203ENST00000429344 NLRC4Q9NPP4 1024 aa16.58■□□□□ 0.25
CACTIN-203ENST00000429344 FAM196BA6NMK8 535 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 FCER1AP12319 257 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 GUCY2FP51841 1108 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 TRAPPC11Q7Z392 1133 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 CACNA2D4Q7Z3S7 1137 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 SH2D3CQ8N5H7 860 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 TMEM60Q9H2L4 133 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 MKRN1Q9UHC7 482 aaKnown RBP16.58■□□□□ 0.24
CACTIN-203ENST00000429344 DMGDHQ9UI17 866 aaKnown RBP16.58■□□□□ 0.24
CACTIN-203ENST00000429344 SHTN1A0MZ66 631 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 NPR1P16066 1061 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 SBK1Q52WX2 424 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 TEKT1Q969V4 418 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 JRKLQ9Y4A0 524 aa16.58■□□□□ 0.24
CACTIN-203ENST00000429344 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 RGL2O15211 777 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 USO1O60763 962 aaKnown RBP16.57■□□□□ 0.24
CACTIN-203ENST00000429344 HMGB2P26583 209 aaKnown RBP16.57■□□□□ 0.24
CACTIN-203ENST00000429344 RXRBP28702 533 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 MNAT1P51948 309 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 AMPD2Q01433 879 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 PDXDC2PQ6P474 469 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 DGKHQ86XP1 1220 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 MYO1AQ9UBC5 1043 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 MYH8P13535 1937 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 AKAP11Q9UKA4 1901 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 TACC1O75410 805 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 MCM3P25205 808 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 MAGEA9P43362 315 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 RRAGAQ7L523 313 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 ZHX3Q9H4I2 956 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.57■□□□□ 0.24
CACTIN-203ENST00000429344 PPFIA4O75335 1185 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 CHRNA5P30532 468 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 RNF187Q5TA31 235 aaPredicted RBP16.57■□□□□ 0.24
CACTIN-203ENST00000429344 ZNF772Q68DY9 489 aaPredicted RBP16.57■□□□□ 0.24
CACTIN-203ENST00000429344 CEP95Q96GE4 821 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.57■□□□□ 0.24
CACTIN-203ENST00000429344 KANSL2Q9H9L4 492 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
CACTIN-203ENST00000429344 FLT1P17948 1338 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 NKRFO15226 690 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACTIN-203ENST00000429344 RCAN1P53805 252 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 PDCLQ13371 301 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 WDR59Q6PJI9 974 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 PPM1EQ8WY54 764 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 CRAMP1Q96RY5 1269 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 COA1Q9GZY4 146 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 DISC1Q9NRI5 854 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 TCP11L1Q9NUJ3 509 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 FAM205AQ6ZU69 1335 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 TECP42680 631 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 PAFAH1B1P43034 410 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 IRF2BP1Q8IU81 584 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 ELOA2Q8IYF1 753 aaPredicted RBP16.56■□□□□ 0.24
CACTIN-203ENST00000429344 EHBP1Q8NDI1 1231 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
CACTIN-203ENST00000429344 SP8Q8IXZ3 490 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 CAPS2Q9BXY5 557 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 ATP6V0A2Q9Y487 856 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 CAPN6Q9Y6Q1 641 aa16.56■□□□□ 0.24
CACTIN-203ENST00000429344 ITIH6Q6UXX5 1313 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 CNTNAP5Q8WYK1 1306 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 NDUFAB1O14561 156 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 CCNT1O60563 726 aaKnown RBP16.55■□□□□ 0.24
CACTIN-203ENST00000429344 RASA1P20936 1047 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 TNNI2P48788 182 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 DNM2P50570 870 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 IQCEQ6IPM2 695 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 PROCA1Q8NCQ7 364 aaPredicted RBP16.55■□□□□ 0.24
CACTIN-203ENST00000429344 MS4A14Q96JA4 679 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 CDK5RAP3Q96JB5 506 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 BCCIPQ9P287 314 aaKnown RBP eCLIP16.55■□□□□ 0.24
CACTIN-203ENST00000429344 MYO5AQ9Y4I1 1855 aaKnown RBP16.55■□□□□ 0.24
CACTIN-203ENST00000429344 ATP2C2O75185 946 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 HPDP32754 393 aaPredicted RBP16.55■□□□□ 0.24
CACTIN-203ENST00000429344 TUBB4BP68371 445 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 LRRC41Q15345 812 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 C6orf50Q9HD87 102 aa16.55■□□□□ 0.24
CACTIN-203ENST00000429344 IL17RBQ9NRM6 502 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms