RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 LLPHQ9BRT6 129 aaKnown RBP25.65■■□□□ 1.7
PTPN18-205ENST00000428843 HMX1Q9NP08 348 aaPredicted RBP25.65■■□□□ 1.7
PTPN18-205ENST00000428843 SH3GLB2Q9NR46 395 aa25.65■■□□□ 1.7
PTPN18-205ENST00000428843 PXMP2Q9NR77 195 aa25.65■■□□□ 1.7
PTPN18-205ENST00000428843 LRRC37A2A6NM11 1700 aa25.65■■□□□ 1.7
PTPN18-205ENST00000428843 CENPFP49454 3210 aa25.64■■□□□ 1.7
PTPN18-205ENST00000428843 ESYT2A0FGR8 921 aa25.64■■□□□ 1.7
PTPN18-205ENST00000428843 EIF2AK2P19525 551 aaKnown RBP25.64■■□□□ 1.7
PTPN18-205ENST00000428843 MRPL12P52815 198 aaKnown RBP25.64■■□□□ 1.7
PTPN18-205ENST00000428843 ARHGEF16Q5VV41 709 aa25.64■■□□□ 1.7
PTPN18-205ENST00000428843 CCDC148Q8NFR7 591 aa25.64■■□□□ 1.7
PTPN18-205ENST00000428843 ZMYND12Q9H0C1 365 aa25.64■■□□□ 1.7
PTPN18-205ENST00000428843 CNPY2Q9Y2B0 182 aa25.64■■□□□ 1.7
PTPN18-205ENST00000428843 EDNRBP24530 442 aa25.63■■□□□ 1.69
PTPN18-205ENST00000428843 WASF1Q92558 559 aa25.63■■□□□ 1.69
PTPN18-205ENST00000428843 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.63■■□□□ 1.693e-9■■■■□ 20.4
PTPN18-205ENST00000428843 RNF208Q9H0X6 261 aa25.63■■□□□ 1.69
PTPN18-205ENST00000428843 GLT8D2Q9H1C3 349 aa25.63■■□□□ 1.69
PTPN18-205ENST00000428843 NRBP1Q9UHY1 535 aa25.63■■□□□ 1.69
PTPN18-205ENST00000428843 IWS1Q96ST2 819 aa25.62■■□□□ 1.69
PTPN18-205ENST00000428843 MPHOSPH6Q99547 160 aaKnown RBP25.62■■□□□ 1.69
PTPN18-205ENST00000428843 ALG1Q9BT22 464 aa25.62■■□□□ 1.69
PTPN18-205ENST00000428843 KATNBL1Q9H079 304 aa25.62■■□□□ 1.69
PTPN18-205ENST00000428843 C6orf50Q9HD87 102 aa25.62■■□□□ 1.69
PTPN18-205ENST00000428843 B4DLN1 442 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 ADAMTS3O15072 1205 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 ZNF865P0CJ78 1059 aaPredicted RBP25.61■■□□□ 1.69
PTPN18-205ENST00000428843 CNGA1P29973 690 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 NLRP5P59047 1200 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 PDE4DQ08499 809 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 ACVR2BQ13705 512 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 TEX2Q8IWB9 1127 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 PDCD2LQ9BRP1 358 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 ABHD16BQ9H3Z7 469 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 PAK6Q9NQU5 681 aaPredicted RBP25.61■■□□□ 1.69
PTPN18-205ENST00000428843 ZHX1Q9UKY1 873 aaPredicted RBP25.61■■□□□ 1.69
PTPN18-205ENST00000428843 FRMPD4Q14CM0 1322 aa25.61■■□□□ 1.69
PTPN18-205ENST00000428843 GNA11P29992 359 aa25.6■■□□□ 1.69
PTPN18-205ENST00000428843 CLK2P49760 499 aaKnown RBP25.6■■□□□ 1.69
PTPN18-205ENST00000428843 PGM5Q15124 567 aa25.6■■□□□ 1.69
PTPN18-205ENST00000428843 EEPD1Q7L9B9 569 aa25.6■■□□□ 1.69
PTPN18-205ENST00000428843 FBXO16Q8IX29 292 aaPredicted RBP25.6■■□□□ 1.69
PTPN18-205ENST00000428843 PCDHA6Q9UN73 950 aa25.6■■□□□ 1.69
PTPN18-205ENST00000428843 PCDHA8Q9Y5H6 950 aa25.6■■□□□ 1.69
PTPN18-205ENST00000428843 CCDC85CA6NKD9 419 aa25.59■■□□□ 1.69
PTPN18-205ENST00000428843 SPDYE3A6NKU9 549 aa25.59■■□□□ 1.69
PTPN18-205ENST00000428843 NR3C2P08235 984 aa25.59■■□□□ 1.69
PTPN18-205ENST00000428843 FAM177A1Q8N128 213 aaPredicted RBP25.59■■□□□ 1.69
PTPN18-205ENST00000428843 IL31RAQ8NI17 732 aa25.59■■□□□ 1.69
PTPN18-205ENST00000428843 TMEM106CQ9BVX2 250 aa25.59■■□□□ 1.69
PTPN18-205ENST00000428843 GJB4Q9NTQ9 266 aa25.59■■□□□ 1.69
PTPN18-205ENST00000428843 TMEM260Q9NX78 707 aa25.59■■□□□ 1.69
PTPN18-205ENST00000428843 XBP1P17861 261 aa25.58■■□□□ 1.69
PTPN18-205ENST00000428843 HMGN5P82970 282 aaKnown RBP25.58■■□□□ 1.69
PTPN18-205ENST00000428843 BICD2Q8TD16 824 aa25.58■■□□□ 1.69
PTPN18-205ENST00000428843 SNX21Q969T3 373 aa25.58■■□□□ 1.69
PTPN18-205ENST00000428843 VTA1Q9NP79 307 aa25.58■■□□□ 1.69
PTPN18-205ENST00000428843 KCNJ14Q9UNX9 436 aa25.58■■□□□ 1.69
PTPN18-205ENST00000428843 SEPT4O43236 478 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 GJB1P08034 283 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 MYCLP12524 364 aaPredicted RBP25.57■■□□□ 1.68
PTPN18-205ENST00000428843 AP3B2Q13367 1082 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 STXBP2Q15833 593 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 JAKMIP3Q5VZ66 844 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 TAPT1Q6NXT6 567 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 PGBD1Q96JS3 809 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 DEFB118Q96PH6 123 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 PHF20Q9BVI0 1012 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 DDX20Q9UHI6 824 aaKnown RBP25.57■■□□□ 1.68
PTPN18-205ENST00000428843 FRMPD3Q5JV73 1810 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 KIAA1217Q5T5P2 1943 aa25.57■■□□□ 1.68
PTPN18-205ENST00000428843 FOSP01100 380 aaPredicted RBP25.56■■□□□ 1.68
PTPN18-205ENST00000428843 AKR1A1P14550 325 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 CCND2P30279 289 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 FOSBP53539 338 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 NPY5RQ15761 445 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 CCDC144BQ3MJ40 725 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 VSIG10LQ86VR7 867 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 REXO1Q8N1G1 1221 aaKnown RBP25.56■■□□□ 1.68
PTPN18-205ENST00000428843 DAGLBQ8NCG7 672 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 RASGRP4Q8TDF6 673 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 PDGFCQ9NRA1 345 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 FAM184BQ9ULE4 1060 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 PCDHA4Q9UN74 947 aa25.56■■□□□ 1.68
PTPN18-205ENST00000428843 K7ELQ4 463 aaPredicted RBP25.55■■□□□ 1.68
PTPN18-205ENST00000428843 CUL4AQ13619 759 aa25.55■■□□□ 1.68
PTPN18-205ENST00000428843 ANO1Q5XXA6 986 aa25.55■■□□□ 1.68
PTPN18-205ENST00000428843 LHX8Q68G74 356 aa25.55■■□□□ 1.68
PTPN18-205ENST00000428843 GALNT17Q6IS24 598 aa25.55■■□□□ 1.68
PTPN18-205ENST00000428843 BLIDQ8IZY5 108 aa25.55■■□□□ 1.68
PTPN18-205ENST00000428843 ANO3Q9BYT9 981 aa25.55■■□□□ 1.68
PTPN18-205ENST00000428843 EHMT1Q9H9B1 1298 aa25.55■■□□□ 1.68
PTPN18-205ENST00000428843 POTEFA5A3E0 1075 aa25.54■■□□□ 1.68
PTPN18-205ENST00000428843 MSCO60682 206 aa25.54■■□□□ 1.68
PTPN18-205ENST00000428843 EIF3JO75822 258 aaKnown RBP25.54■■□□□ 1.68
PTPN18-205ENST00000428843 ADCYAP1R1P41586 468 aa25.54■■□□□ 1.68
PTPN18-205ENST00000428843 MCTP2Q6DN12 878 aa25.54■■□□□ 1.68
PTPN18-205ENST00000428843 FAM184AQ8NB25 1140 aa25.54■■□□□ 1.68
PTPN18-205ENST00000428843 ZFP91Q96JP5 570 aaPredicted RBP25.54■■□□□ 1.68
PTPN18-205ENST00000428843 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms