RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 PHOX2BQ99453 314 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 ZNF318Q5VUA4 2279 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 C5orf42Q9H799 3197 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 C19orf67A6NJJ6 358 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 M0R2C6 588 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 ARIH2O95376 493 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 ICAM1P05362 532 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 EDNRBP24530 442 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 SLC1A4P43007 532 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 NOVP48745 357 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 RBL2Q08999 1139 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 BFSP2Q13515 415 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 MBTPS1Q14703 1052 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 COL19A1Q14993 1142 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 LRRFIP1Q32MZ4 808 aaKnown RBP9.57□□□□□ -0.88
CSTF1-203ENST00000428552 RCSD1Q6JBY9 416 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 GDF6Q6KF10 455 aaPredicted RBP9.57□□□□□ -0.88
CSTF1-203ENST00000428552 ZSCAN25Q6NSZ9 544 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 SLC30A10Q6XR72 485 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 ZNF444Q8N0Y2 327 aaPredicted RBP9.57□□□□□ -0.88
CSTF1-203ENST00000428552 RETREG2Q8NC44 543 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 AFAP1L1Q8TED9 768 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 CLEC4DQ8WXI8 215 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 KAT2BQ92831 832 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 TGS1Q96RS0 853 aaKnown RBP9.57□□□□□ -0.88
CSTF1-203ENST00000428552 RAD9AQ99638 391 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 BCL11AQ9H165 835 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 RANBP17Q9H2T7 1088 aaKnown RBP9.57□□□□□ -0.88
CSTF1-203ENST00000428552 IL17RBQ9NRM6 502 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 CCPG1Q9ULG6 757 aa9.57□□□□□ -0.88
CSTF1-203ENST00000428552 TRIP12Q14669 1992 aaPredicted RBP9.57□□□□□ -0.88
CSTF1-203ENST00000428552 LOC102724159A0A0B4J2E5 919 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 FOXP2O15409 715 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 GPAA1O43292 621 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 DCXO43602 365 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 NMT2O60551 498 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 RAB11FIP3O75154 756 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 ALADP13716 330 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 SELPP16109 830 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 SSTR3P32745 418 aaPredicted RBP9.56□□□□□ -0.88
CSTF1-203ENST00000428552 KCNJ6P48051 423 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 TFAP4Q01664 338 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 ZP2Q05996 745 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 PWP2Q15269 919 aaKnown RBP9.56□□□□□ -0.88
CSTF1-203ENST00000428552 PTGISQ16647 500 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 TRIM71Q2Q1W2 868 aaKnown RBP9.56□□□□□ -0.88
CSTF1-203ENST00000428552 TTBK2Q6IQ55 1244 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 CNKSR3Q6P9H4 555 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 HFE2Q6ZVN8 426 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 LRRC8DQ7L1W4 858 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 SESTD1Q86VW0 696 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 IFNL3Q8IZI9 196 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 KBTBD3Q8NAB2 608 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 APPBP2Q92624 585 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 WNT8BQ93098 351 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 UIMC1Q96RL1 719 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 C17orf80Q9BSJ5 609 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 KCNH6Q9H252 994 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 INCENPQ9NQS7 918 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 ZBTB40Q9NUA8 1239 aa9.56□□□□□ -0.88
CSTF1-203ENST00000428552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.56□□□□□ -0.88
CSTF1-203ENST00000428552 ATG2AQ2TAZ0 1938 aa9.55□□□□□ -0.88
CSTF1-203ENST00000428552 H3BQ06 376 aaPredicted RBP9.55□□□□□ -0.88
CSTF1-203ENST00000428552 SMARCA5O60264 1052 aaPredicted RBP9.55□□□□□ -0.88
CSTF1-203ENST00000428552 TSPY3P0CV98 308 aa9.55□□□□□ -0.88
CSTF1-203ENST00000428552 TSPY8P0CW00 308 aa9.55□□□□□ -0.88
CSTF1-203ENST00000428552 CKBP12277 381 aa9.55□□□□□ -0.88
CSTF1-203ENST00000428552 TDO2P48775 406 aa9.55□□□□□ -0.88
CSTF1-203ENST00000428552 IKQ13123 557 aaPredicted RBP9.55□□□□□ -0.88
CSTF1-203ENST00000428552 CCDC62Q6P9F0 684 aa9.55□□□□□ -0.88
CSTF1-203ENST00000428552 BTNL9Q6UXG8 535 aa9.55□□□□□ -0.88
CSTF1-203ENST00000428552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.55□□□□□ -0.88
CSTF1-203ENST00000428552 CAGE1Q8TC20 777 aa9.55□□□□□ -0.88
CSTF1-203ENST00000428552 SP7Q8TDD2 431 aaPredicted RBP9.55□□□□□ -0.88
CSTF1-203ENST00000428552 ZBED2Q9BTP6 218 aa9.55□□□□□ -0.88
CSTF1-203ENST00000428552 GPHNQ9NQX3 736 aaPredicted RBP9.55□□□□□ -0.88
CSTF1-203ENST00000428552 ADD3Q9UEY8 706 aaKnown RBP9.55□□□□□ -0.88
CSTF1-203ENST00000428552 ABHD14A-ACY1A0A1B0GW23 586 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 PATL2C9JE40 543 aaKnown RBP9.54□□□□□ -0.88
CSTF1-203ENST00000428552 NKRFO15226 690 aaKnown RBP eCLIP9.54□□□□□ -0.88
CSTF1-203ENST00000428552 RNF113AO15541 343 aaKnown RBP9.54□□□□□ -0.88
CSTF1-203ENST00000428552 KPNA6O60684 536 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 SLC16A2P36021 539 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 LTBRP36941 435 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 HTRA4P83105 476 aaPredicted RBP9.54□□□□□ -0.88
CSTF1-203ENST00000428552 HIC1Q14526 733 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 PPP2R5BQ15173 497 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 FAM117BQ6P1L5 589 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 PRSS33Q8NF86 280 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 MRPL38Q96DV4 380 aaKnown RBP9.54□□□□□ -0.88
CSTF1-203ENST00000428552 SEC62Q99442 399 aaKnown RBP9.54□□□□□ -0.88
CSTF1-203ENST00000428552 ZNF287Q9HBT7 754 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 ALG13Q9NP73 1137 aaKnown RBP9.54□□□□□ -0.88
CSTF1-203ENST00000428552 ISY1Q9ULR0 285 aaKnown RBP9.54□□□□□ -0.88
CSTF1-203ENST00000428552 COL4A6Q14031 1691 aa9.54□□□□□ -0.88
CSTF1-203ENST00000428552 MYO15AQ9UKN7 3530 aa9.53□□□□□ -0.88
CSTF1-203ENST00000428552 CFAP54Q96N23 3096 aa9.53□□□□□ -0.88
CSTF1-203ENST00000428552 DMDP11532 3685 aa9.53□□□□□ -0.88
CSTF1-203ENST00000428552 PTPDC1A2A3K4 754 aa9.53□□□□□ -0.88
CSTF1-203ENST00000428552 MMP3P08254 477 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms