RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 ANTXR2P58335 489 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 GHRHRQ02643 423 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 FPGSQ05932 587 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 ITGA7Q13683 1181 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 TMEM63BQ5T3F8 832 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 RNF20Q5VTR2 975 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 ARHGEF16Q5VV41 709 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 FAM126BQ8IXS8 530 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 CTCFLQ8NI51 663 aaPredicted RBP17.6■□□□□ 0.41
PHF1-204ENST00000427826 TMEM87BQ96K49 555 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 SENP2Q9HC62 589 aa17.6■□□□□ 0.41
PHF1-204ENST00000427826 GPHNQ9NQX3 736 aaPredicted RBP17.6■□□□□ 0.41
PHF1-204ENST00000427826 PNMA6FA0A0J9YX94 578 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 EIF3JO75822 258 aaKnown RBP17.59■□□□□ 0.41
PHF1-204ENST00000427826 DDAH1O94760 285 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 ITGB8P26012 769 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 HSD17B4P51659 736 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 NECTIN1Q15223 517 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 SHHQ15465 462 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 CREB3L3Q68CJ9 461 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 NFXL1Q6ZNB6 911 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 HOMER1Q86YM7 354 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 CCDC136Q96JN2 1154 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 LZTS2Q9BRK4 669 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 LY9Q9HBG7 655 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 LCTP09848 1927 aa17.59■□□□□ 0.41
PHF1-204ENST00000427826 CCDC69A6NI79 296 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 CD4P01730 458 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 PTGS1P23219 599 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 SMARCA1P28370 1054 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 LIFRP42702 1097 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 GNAQP50148 359 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 MFSD5Q6N075 450 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 ZNF654Q8IZM8 581 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 PIGSQ96S52 555 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 MTG1Q9BT17 334 aaPredicted RBP17.58■□□□□ 0.4
PHF1-204ENST00000427826 COL20A1Q9P218 1284 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 LRRC37A2A6NM11 1700 aa17.58■□□□□ 0.4
PHF1-204ENST00000427826 LTBP2Q14767 1821 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 A6NJR5 290 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 GCOM1H8Y6P7 765 aaPredicted RBP17.57■□□□□ 0.4
PHF1-204ENST00000427826 PPP1R11O60927 126 aaPredicted RBP17.57■□□□□ 0.4
PHF1-204ENST00000427826 CDC45O75419 566 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 MYL3P08590 195 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 POLR2MP0CAP2 368 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 CALM1P0DP23 149 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 CALM2P0DP24 149 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 CALM3P0DP25 149 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 EIF2AK2P19525 551 aaKnown RBP17.57■□□□□ 0.4
PHF1-204ENST00000427826 C9orf50Q5SZB4 431 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 TMEM199Q8N511 208 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 DEFB123Q8N688 67 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 PXMP2Q9NR77 195 aa17.57■□□□□ 0.4
PHF1-204ENST00000427826 GRIN2DO15399 1336 aa17.56■□□□□ 0.4
PHF1-204ENST00000427826 SH2B2O14492 632 aaPredicted RBP17.56■□□□□ 0.4
PHF1-204ENST00000427826 OPLAHO14841 1288 aa17.56■□□□□ 0.4
PHF1-204ENST00000427826 CYTH3O43739 400 aa17.56■□□□□ 0.4
PHF1-204ENST00000427826 NR3C2P08235 984 aa17.56■□□□□ 0.4
PHF1-204ENST00000427826 PURAQ00577 322 aaKnown RBP17.56■□□□□ 0.4
PHF1-204ENST00000427826 PPIGQ13427 754 aaKnown RBP eCLIP17.56■□□□□ 0.45e-13■■■■□ 19.4
PHF1-204ENST00000427826 FAM109BQ6ICB4 259 aaPredicted RBP17.56■□□□□ 0.4
PHF1-204ENST00000427826 CCDC62Q6P9F0 684 aa17.56■□□□□ 0.4
PHF1-204ENST00000427826 SEPT14Q6ZU15 432 aa17.56■□□□□ 0.4
PHF1-204ENST00000427826 RRP36Q96EU6 259 aaKnown RBP17.56■□□□□ 0.4
PHF1-204ENST00000427826 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
PHF1-204ENST00000427826 GH1P01241 217 aa17.55■□□□□ 0.4
PHF1-204ENST00000427826 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
PHF1-204ENST00000427826 SUPT20HL2P0C7V6 817 aa17.55■□□□□ 0.4
PHF1-204ENST00000427826 PSMC6P62333 389 aa17.55■□□□□ 0.4
PHF1-204ENST00000427826 SLC35G1Q2M3R5 365 aa17.55■□□□□ 0.4
PHF1-204ENST00000427826 KCNV1Q6PIU1 500 aa17.55■□□□□ 0.4
PHF1-204ENST00000427826 SKAP1Q86WV1 359 aa17.55■□□□□ 0.4
PHF1-204ENST00000427826 SEC63Q9UGP8 760 aaKnown RBP17.55■□□□□ 0.4
PHF1-204ENST00000427826 ARIH2O95376 493 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 NEFLP07196 543 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 EPHB4P54760 987 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 SMAD3P84022 425 aaKnown RBP17.54■□□□□ 0.4
PHF1-204ENST00000427826 LY6KQ17RY6 165 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 SYNE3Q6ZMZ3 975 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 COPS5Q92905 334 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 RNPC3Q96LT9 517 aaKnown RBP17.54■□□□□ 0.4
PHF1-204ENST00000427826 PDCD2LQ9BRP1 358 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 TRPV6Q9H1D0 765 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
PHF1-204ENST00000427826 HIPK3Q9H422 1215 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 MRVI1Q9Y6F6 885 aa17.54■□□□□ 0.4
PHF1-204ENST00000427826 B4GALT4O60513 344 aa17.53■□□□□ 0.4
PHF1-204ENST00000427826 MYCLP12524 364 aaPredicted RBP17.53■□□□□ 0.4
PHF1-204ENST00000427826 HOXA13P31271 388 aaPredicted RBP17.53■□□□□ 0.4
PHF1-204ENST00000427826 PTPN11Q06124 597 aaPredicted RBP17.53■□□□□ 0.4
PHF1-204ENST00000427826 KRT32Q14532 448 aa17.53■□□□□ 0.4
PHF1-204ENST00000427826 TSGA10IPQ3SY00 556 aa17.53■□□□□ 0.4
PHF1-204ENST00000427826 NFRKBQ6P4R8 1299 aa17.53■□□□□ 0.4
PHF1-204ENST00000427826 VSIG10LQ86VR7 867 aa17.53■□□□□ 0.4
PHF1-204ENST00000427826 NEK1Q96PY6 1258 aa17.53■□□□□ 0.4
PHF1-204ENST00000427826 MYL10Q9BUA6 226 aa17.53■□□□□ 0.4
PHF1-204ENST00000427826 PPP1R12CQ9BZL4 782 aa17.53■□□□□ 0.4
PHF1-204ENST00000427826 DDX41Q9UJV9 622 aaKnown RBP17.53■□□□□ 0.4
PHF1-204ENST00000427826 TGFB3P10600 412 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms