RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 RMND1Q9NWS8 449 aa29.95■■■□□ 2.39
SH3GL3-202ENST00000427482 USP14P54578 494 aa29.94■■■□□ 2.38
SH3GL3-202ENST00000427482 PRPF38AQ8NAV1 312 aaKnown RBP29.94■■■□□ 2.38
SH3GL3-202ENST00000427482 MARCH6O60337 910 aa29.94■■■□□ 2.38
SH3GL3-202ENST00000427482 GRB10Q13322 594 aa29.94■■■□□ 2.38
SH3GL3-202ENST00000427482 DGKZQ13574 1117 aa29.94■■■□□ 2.38
SH3GL3-202ENST00000427482 Q4G0T1 1027 aa29.94■■■□□ 2.38
SH3GL3-202ENST00000427482 ZKSCAN4Q969J2 545 aaPredicted RBP29.94■■■□□ 2.38
SH3GL3-202ENST00000427482 AS3MTQ9HBK9 375 aa29.94■■■□□ 2.38
SH3GL3-202ENST00000427482 EMILIN3Q9NT22 766 aa29.94■■■□□ 2.38
SH3GL3-202ENST00000427482 RBBP6Q7Z6E9 1792 aaKnown RBP29.93■■■□□ 2.38
SH3GL3-202ENST00000427482 GCOM1H8Y6P7 765 aaPredicted RBP29.93■■■□□ 2.38
SH3GL3-202ENST00000427482 POLR2MP0CAP2 368 aa29.93■■■□□ 2.38
SH3GL3-202ENST00000427482 CD44P16070 742 aaKnown RBP29.93■■■□□ 2.38
SH3GL3-202ENST00000427482 CIITAP33076 1130 aa29.93■■■□□ 2.38
SH3GL3-202ENST00000427482 RTN4Q9NQC3 1192 aaKnown RBP29.93■■■□□ 2.38
SH3GL3-202ENST00000427482 PICK1Q9NRD5 415 aa29.93■■■□□ 2.38
SH3GL3-202ENST00000427482 FANCLQ9NW38 375 aa29.93■■■□□ 2.38
SH3GL3-202ENST00000427482 PCDHA12Q9UN75 941 aa29.93■■■□□ 2.38
SH3GL3-202ENST00000427482 ZNF536O15090 1300 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 CFBP00751 764 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 ICAM1P05362 532 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 CYP3A4P08684 503 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 PTPRAP18433 802 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 VCAM1P19320 739 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 PNMA5Q96PV4 448 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 MED15Q96RN5 788 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 ADARB2Q9NS39 739 aaKnown RBP29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 STK17AQ9UEE5 414 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 PPP1R3GB7ZBB8 358 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 ATP1A3P13637 1013 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 FANCCQ00597 558 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 SPP2Q13103 211 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 KRT79Q5XKE5 535 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 SLFN12Q8IYM2 578 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 SNX29Q8TEQ0 813 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 TBC1D5Q92609 795 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 GJA10Q969M2 543 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 KLRG1Q96E93 195 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 IFNKQ9P0W0 207 aa29.92■■■□□ 2.38
SH3GL3-202ENST00000427482 TBX3O15119 743 aa29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 KCNB1Q14721 858 aa29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 ZNF658Q5TYW1 1059 aaPredicted RBP29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 TRMT44Q8IYL2 757 aaKnown RBP29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 SMYD4Q8IYR2 804 aaPredicted RBP29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 ETNPPLQ8TBG4 499 aa29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 LENG9Q96B70 501 aa29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 ZNF830Q96NB3 372 aaPredicted RBP29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 TANGO6Q9C0B7 1094 aa29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 XPO4Q9C0E2 1151 aaKnown RBP29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 FZD1Q9UP38 647 aa29.91■■■□□ 2.38
SH3GL3-202ENST00000427482 CLCN1P35523 988 aa29.9■■■□□ 2.38
SH3GL3-202ENST00000427482 BACE1P56817 501 aa29.9■■■□□ 2.38
SH3GL3-202ENST00000427482 SEMA3FQ13275 785 aa29.9■■■□□ 2.38
SH3GL3-202ENST00000427482 SUPT20HL1Q3ZLR7 823 aa29.9■■■□□ 2.38
SH3GL3-202ENST00000427482 FCHSD1Q86WN1 690 aa29.9■■■□□ 2.38
SH3GL3-202ENST00000427482 ZNF280CQ8ND82 737 aa29.9■■■□□ 2.38
SH3GL3-202ENST00000427482 CDK5RAP3Q96JB5 506 aa29.9■■■□□ 2.38
SH3GL3-202ENST00000427482 CCPG1Q9ULG6 757 aa29.9■■■□□ 2.38
SH3GL3-202ENST00000427482 NFE2L3Q9Y4A8 694 aa29.9■■■□□ 2.38
SH3GL3-202ENST00000427482 KLRC4O43908 158 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 TMEM119Q4V9L6 283 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 PRR16Q569H4 304 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 BLOC1S4Q9NUP1 217 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 NRBP1Q9UHY1 535 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 RLFQ13129 1914 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 PAPPA2Q9BXP8 1791 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 SYNRGQ9UMZ2 1314 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 FAM86B1E9PN63 330 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 FAM86B2P0C5J1 330 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 NOL9Q5SY16 702 aaKnown RBP29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 AGBL1Q96MI9 1066 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 C7orf25Q9BPX7 421 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 NUDT12Q9BQG2 462 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 RPAP3Q9H6T3 665 aaPredicted RBP29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 PPP1R9AQ9ULJ8 1098 aa29.89■■■□□ 2.38
SH3GL3-202ENST00000427482 ZNF18P17022 549 aa29.88■■■□□ 2.37
SH3GL3-202ENST00000427482 PTGS1P23219 599 aa29.88■■■□□ 2.37
SH3GL3-202ENST00000427482 C9orf131Q5VYM1 1079 aa29.88■■■□□ 2.37
SH3GL3-202ENST00000427482 CCDC186Q7Z3E2 898 aa29.88■■■□□ 2.37
SH3GL3-202ENST00000427482 TRIM9Q9C026 710 aa29.88■■■□□ 2.37
SH3GL3-202ENST00000427482 SLC38A10Q9HBR0 1119 aa29.88■■■□□ 2.37
SH3GL3-202ENST00000427482 WDR90Q96KV7 1748 aa29.88■■■□□ 2.37
SH3GL3-202ENST00000427482 FLOT1O75955 427 aa29.87■■■□□ 2.37
SH3GL3-202ENST00000427482 AMPD3Q01432 767 aa29.87■■■□□ 2.37
SH3GL3-202ENST00000427482 KMT5BQ4FZB7 885 aa29.87■■■□□ 2.37
SH3GL3-202ENST00000427482 KLHL10Q6JEL2 608 aa29.87■■■□□ 2.37
SH3GL3-202ENST00000427482 KCNF1Q9H3M0 494 aa29.87■■■□□ 2.37
SH3GL3-202ENST00000427482 SLC26A4O43511 780 aa29.87■■■□□ 2.37
SH3GL3-202ENST00000427482 HYIQ5T013 277 aa29.87■■■□□ 2.37
SH3GL3-202ENST00000427482 EHMT1Q9H9B1 1298 aa29.87■■■□□ 2.37
SH3GL3-202ENST00000427482 COL11A1P12107 1806 aaPredicted RBP29.87■■■□□ 2.37
SH3GL3-202ENST00000427482 OTOFQ9HC10 1997 aa29.86■■■□□ 2.37
SH3GL3-202ENST00000427482 RHOBTB3O94955 611 aa29.86■■■□□ 2.37
SH3GL3-202ENST00000427482 CCDC144BQ3MJ40 725 aa29.86■■■□□ 2.37
SH3GL3-202ENST00000427482 SPATA1Q5VX52 437 aa29.86■■■□□ 2.37
SH3GL3-202ENST00000427482 C12orf42Q96LP6 360 aa29.86■■■□□ 2.37
SH3GL3-202ENST00000427482 FAM20AQ96MK3 541 aa29.86■■■□□ 2.37
SH3GL3-202ENST00000427482 ZHX2Q9Y6X8 837 aa29.86■■■□□ 2.37
SH3GL3-202ENST00000427482 KDM3AQ9Y4C1 1321 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms