RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 GLT8D2Q9H1C3 349 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 UNC93B1Q9H1C4 597 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 PXMP2Q9NR77 195 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 CYBAP13498 195 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 EIF2AK2P19525 551 aaKnown RBP28.11■■■□□ 2.09
VEGFA-209ENST00000425836 WASF1Q92558 559 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 C6orf50Q9HD87 102 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 HMX1Q9NP08 348 aaPredicted RBP28.11■■■□□ 2.09
VEGFA-209ENST00000425836 NRBP1Q9UHY1 535 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 CNPY2Q9Y2B0 182 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 RPTORQ8N122 1335 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 ADAMTS3O15072 1205 aa28.1■■■□□ 2.09
VEGFA-209ENST00000425836 CCL5P13501 91 aa28.1■■■□□ 2.09
VEGFA-209ENST00000425836 CCND3P30281 292 aaPredicted RBP28.1■■■□□ 2.09
VEGFA-209ENST00000425836 SNX21Q969T3 373 aa28.1■■■□□ 2.09
VEGFA-209ENST00000425836 ALG1Q9BT22 464 aa28.1■■■□□ 2.09
VEGFA-209ENST00000425836 CENPFP49454 3210 aa28.09■■■□□ 2.09
VEGFA-209ENST00000425836 ZNF865P0CJ78 1059 aaPredicted RBP28.09■■■□□ 2.09
VEGFA-209ENST00000425836 NLRP5P59047 1200 aa28.09■■■□□ 2.09
VEGFA-209ENST00000425836 FAM177A1Q8N128 213 aaPredicted RBP28.09■■■□□ 2.09
VEGFA-209ENST00000425836 IWS1Q96ST2 819 aa28.09■■■□□ 2.09
VEGFA-209ENST00000425836 PDCD2LQ9BRP1 358 aa28.09■■■□□ 2.09
VEGFA-209ENST00000425836 KATNBL1Q9H079 304 aa28.09■■■□□ 2.09
VEGFA-209ENST00000425836 ABHD16BQ9H3Z7 469 aa28.09■■■□□ 2.09
VEGFA-209ENST00000425836 B4DLN1 442 aa28.08■■■□□ 2.09
VEGFA-209ENST00000425836 GNA11P29992 359 aa28.08■■■□□ 2.09
VEGFA-209ENST00000425836 CLK2P49760 499 aaKnown RBP28.08■■■□□ 2.09
VEGFA-209ENST00000425836 ACVR2BQ13705 512 aa28.08■■■□□ 2.09
VEGFA-209ENST00000425836 MPHOSPH6Q99547 160 aaKnown RBP28.08■■■□□ 2.09
VEGFA-209ENST00000425836 RNF208Q9H0X6 261 aa28.08■■■□□ 2.09
VEGFA-209ENST00000425836 GJB4Q9NTQ9 266 aa28.08■■■□□ 2.09
VEGFA-209ENST00000425836 LCTP09848 1927 aa28.08■■■□□ 2.09
VEGFA-209ENST00000425836 NR3C2P08235 984 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 HMGN5P82970 282 aaKnown RBP28.07■■■□□ 2.08
VEGFA-209ENST00000425836 PDE4DQ08499 809 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.07■■■□□ 2.083e-7■■■■□ 25.4
VEGFA-209ENST00000425836 TMEM260Q9NX78 707 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 PCDHA6Q9UN73 950 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 PCDHA8Q9Y5H6 950 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 PLXNA1Q9UIW2 1896 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 FRMPD4Q14CM0 1322 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 PGM5Q15124 567 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 EEPD1Q7L9B9 569 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 PAK6Q9NQU5 681 aaPredicted RBP28.07■■■□□ 2.08
VEGFA-209ENST00000425836 ZHX1Q9UKY1 873 aaPredicted RBP28.07■■■□□ 2.08
VEGFA-209ENST00000425836 KCNJ14Q9UNX9 436 aa28.07■■■□□ 2.08
VEGFA-209ENST00000425836 SPDYE3A6NKU9 549 aa28.06■■■□□ 2.08
VEGFA-209ENST00000425836 XBP1P17861 261 aa28.06■■■□□ 2.08
VEGFA-209ENST00000425836 CNGA1P29973 690 aa28.06■■■□□ 2.08
VEGFA-209ENST00000425836 CUL4AQ13619 759 aa28.06■■■□□ 2.08
VEGFA-209ENST00000425836 FBXO16Q8IX29 292 aaPredicted RBP28.06■■■□□ 2.08
VEGFA-209ENST00000425836 IL31RAQ8NI17 732 aa28.06■■■□□ 2.08
VEGFA-209ENST00000425836 RBBP6Q7Z6E9 1792 aaKnown RBP28.06■■■□□ 2.08
VEGFA-209ENST00000425836 NPY5RQ15761 445 aa28.05■■■□□ 2.08
VEGFA-209ENST00000425836 VSIG10LQ86VR7 867 aa28.05■■■□□ 2.08
VEGFA-209ENST00000425836 BICD2Q8TD16 824 aa28.05■■■□□ 2.08
VEGFA-209ENST00000425836 PHF20Q9BVI0 1012 aa28.05■■■□□ 2.08
VEGFA-209ENST00000425836 PCDHA4Q9UN74 947 aa28.05■■■□□ 2.08
VEGFA-209ENST00000425836 K7ELQ4 463 aaPredicted RBP28.04■■■□□ 2.08
VEGFA-209ENST00000425836 FOSP01100 380 aaPredicted RBP28.04■■■□□ 2.08
VEGFA-209ENST00000425836 STXBP2Q15833 593 aa28.04■■■□□ 2.08
VEGFA-209ENST00000425836 JAKMIP3Q5VZ66 844 aa28.04■■■□□ 2.08
VEGFA-209ENST00000425836 REXO1Q8N1G1 1221 aaKnown RBP28.04■■■□□ 2.08
VEGFA-209ENST00000425836 PGBD1Q96JS3 809 aa28.04■■■□□ 2.08
VEGFA-209ENST00000425836 VTA1Q9NP79 307 aa28.04■■■□□ 2.08
VEGFA-209ENST00000425836 SEPT4O43236 478 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 MYCLP12524 364 aaPredicted RBP28.03■■■□□ 2.08
VEGFA-209ENST00000425836 AP3B2Q13367 1082 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 GALNT17Q6IS24 598 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 TAPT1Q6NXT6 567 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 RASGRP4Q8TDF6 673 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 ANO3Q9BYT9 981 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 PDGFCQ9NRA1 345 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 FAM184AQ8NB25 1140 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 DAGLBQ8NCG7 672 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 DEFB118Q96PH6 123 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 TMEM106CQ9BVX2 250 aa28.03■■■□□ 2.08
VEGFA-209ENST00000425836 EIF3JO75822 258 aaKnown RBP28.02■■■□□ 2.08
VEGFA-209ENST00000425836 GJB1P08034 283 aa28.02■■■□□ 2.08
VEGFA-209ENST00000425836 CCND2P30279 289 aa28.02■■■□□ 2.08
VEGFA-209ENST00000425836 FOSBP53539 338 aa28.02■■■□□ 2.08
VEGFA-209ENST00000425836 CCDC144BQ3MJ40 725 aa28.02■■■□□ 2.08
VEGFA-209ENST00000425836 BLIDQ8IZY5 108 aa28.02■■■□□ 2.08
VEGFA-209ENST00000425836 DDX20Q9UHI6 824 aaKnown RBP28.02■■■□□ 2.08
VEGFA-209ENST00000425836 FAM184BQ9ULE4 1060 aa28.02■■■□□ 2.08
VEGFA-209ENST00000425836 CCDC85CA6NKD9 419 aa28.01■■■□□ 2.07
VEGFA-209ENST00000425836 M0R2N6 131 aa28.01■■■□□ 2.07
VEGFA-209ENST00000425836 LHX8Q68G74 356 aa28.01■■■□□ 2.07
VEGFA-209ENST00000425836 MCTP2Q6DN12 878 aa28.01■■■□□ 2.07
VEGFA-209ENST00000425836 ZFP91Q96JP5 570 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-209ENST00000425836 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-209ENST00000425836 AKR1A1P14550 325 aa28■■■□□ 2.07
VEGFA-209ENST00000425836 MRPS9P82933 396 aaKnown RBP28■■■□□ 2.07
VEGFA-209ENST00000425836 PCNX4Q63HM2 1172 aa28■■■□□ 2.07
VEGFA-209ENST00000425836 HSCBQ8IWL3 235 aa28■■■□□ 2.07
VEGFA-209ENST00000425836 EHMT1Q9H9B1 1298 aa28■■■□□ 2.07
VEGFA-209ENST00000425836 ADCYAP1R1P41586 468 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 TRIM29Q14134 588 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 ANO1Q5XXA6 986 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 KRT40Q6A162 431 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms