RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 CCDC85BQ15834 202 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-209ENST00000425239 SCFD2Q8WU76 684 aa17.6■□□□□ 0.41
ATG4B-209ENST00000425239 ZKSCAN3Q9BRR0 538 aa17.6■□□□□ 0.41
ATG4B-209ENST00000425239 UBA5Q9GZZ9 404 aa17.6■□□□□ 0.41
ATG4B-209ENST00000425239 OSBPL3Q9H4L5 887 aa17.6■□□□□ 0.41
ATG4B-209ENST00000425239 COL20A1Q9P218 1284 aa17.6■□□□□ 0.41
ATG4B-209ENST00000425239 TNFRSF10AO00220 468 aa17.59■□□□□ 0.41
ATG4B-209ENST00000425239 PITPNM1O00562 1244 aa17.59■□□□□ 0.41
ATG4B-209ENST00000425239 IQCF3P0C7M6 154 aa17.59■□□□□ 0.41
ATG4B-209ENST00000425239 ATP2A2P16615 1042 aaKnown RBP17.59■□□□□ 0.41
ATG4B-209ENST00000425239 PTPN11Q06124 597 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-209ENST00000425239 PDE4DQ08499 809 aa17.59■□□□□ 0.41
ATG4B-209ENST00000425239 LNPKQ9C0E8 428 aa17.59■□□□□ 0.41
ATG4B-209ENST00000425239 MAF1Q9H063 256 aa17.59■□□□□ 0.41
ATG4B-209ENST00000425239 NCOR1O75376 2440 aa17.58■□□□□ 0.41
ATG4B-209ENST00000425239 KPNA6O60684 536 aa17.58■□□□□ 0.4
ATG4B-209ENST00000425239 ARHGEF15O94989 841 aa17.58■□□□□ 0.4
ATG4B-209ENST00000425239 TXNP10599 105 aaKnown RBP17.58■□□□□ 0.4
ATG4B-209ENST00000425239 IGFBP4P22692 258 aa17.58■□□□□ 0.4
ATG4B-209ENST00000425239 PPP2R5BQ15173 497 aa17.58■□□□□ 0.4
ATG4B-209ENST00000425239 GPATCH4Q5T3I0 446 aaKnown RBP17.58■□□□□ 0.4
ATG4B-209ENST00000425239 DEFB128Q7Z7B8 93 aa17.58■□□□□ 0.4
ATG4B-209ENST00000425239 PLEKHM2Q8IWE5 1019 aa17.58■□□□□ 0.4
ATG4B-209ENST00000425239 SYTL5Q8TDW5 730 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-209ENST00000425239 KAT2BQ92831 832 aa17.58■□□□□ 0.4
ATG4B-209ENST00000425239 TAAR1Q96RJ0 339 aa17.58■□□□□ 0.4
ATG4B-209ENST00000425239 THEGQ9P2T0 379 aa17.58■□□□□ 0.4
ATG4B-209ENST00000425239 TRIP12Q14669 1992 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-209ENST00000425239 PTPRSQ13332 1948 aa17.57■□□□□ 0.4
ATG4B-209ENST00000425239 USH1GQ495M9 461 aa17.57■□□□□ 0.4
ATG4B-209ENST00000425239 PPP2R2DQ66LE6 453 aa17.57■□□□□ 0.4
ATG4B-209ENST00000425239 ADGRF4Q8IZF3 695 aa17.57■□□□□ 0.4
ATG4B-209ENST00000425239 ESR2Q92731 530 aa17.57■□□□□ 0.4
ATG4B-209ENST00000425239 ZSWIM5Q9P217 1185 aa17.57■□□□□ 0.4
ATG4B-209ENST00000425239 EPOPA6NHQ4 379 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 RBAK-RBAKDNI3L0D1 243 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 RFXAPO00287 272 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 OPLAHO14841 1288 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 IGHDP01880 384 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 CA3P07451 260 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 BMP1P13497 986 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 RFC2P35250 354 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 MRPS5P82675 430 aaKnown RBP17.56■□□□□ 0.4
ATG4B-209ENST00000425239 ARHGAP1Q07960 439 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 LY6KQ17RY6 165 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 SESTD1Q86VW0 696 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 PNMA1Q8ND90 353 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 PHOSPHO2Q8TCD6 241 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 RILPL2Q969X0 211 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 RNF41Q9H4P4 317 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-209ENST00000425239 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-209ENST00000425239 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-209ENST00000425239 KIAA1217Q5T5P2 1943 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 PRRC2BQ5JSZ5 2229 aaKnown RBP17.56■□□□□ 0.4
ATG4B-209ENST00000425239 TANC1Q9C0D5 1861 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
ATG4B-209ENST00000425239 ZBBXA8MT70 800 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 TRIM6-TRIM34B2RNG4 842 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 ZNF213O14771 459 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 KDM4AO75164 1064 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 NT5C2P49902 561 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 CDC37Q16543 378 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-209ENST00000425239 FAM47CQ5HY64 1035 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 TMEM67Q5HYA8 995 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-209ENST00000425239 ADAMTS19Q8TE59 1207 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 AFG1LQ8WV93 481 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 JMJD4Q9H9V9 463 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 MTCH2Q9Y6C9 303 aa17.55■□□□□ 0.4
ATG4B-209ENST00000425239 MMP3P08254 477 aa17.54■□□□□ 0.4
ATG4B-209ENST00000425239 GHRHRQ02643 423 aa17.54■□□□□ 0.4
ATG4B-209ENST00000425239 NUCB1Q02818 461 aa17.54■□□□□ 0.4
ATG4B-209ENST00000425239 TAP1Q03518 808 aa17.54■□□□□ 0.4
ATG4B-209ENST00000425239 QRICH1Q2TAL8 776 aa17.54■□□□□ 0.4
ATG4B-209ENST00000425239 BRDTQ58F21 947 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-209ENST00000425239 GDF6Q6KF10 455 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-209ENST00000425239 SPRED2Q7Z698 418 aa17.54■□□□□ 0.4
ATG4B-209ENST00000425239 DHX38Q92620 1227 aaKnown RBP17.54■□□□□ 0.4
ATG4B-209ENST00000425239 IWS1Q96ST2 819 aa17.54■□□□□ 0.4
ATG4B-209ENST00000425239 ZSCAN10Q96SZ4 725 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-209ENST00000425239 MPHOSPH6Q99547 160 aaKnown RBP17.54■□□□□ 0.4
ATG4B-209ENST00000425239 DDX41Q9UJV9 622 aaKnown RBP17.54■□□□□ 0.4
ATG4B-209ENST00000425239 ABCB11O95342 1321 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 RAD50Q92878 1312 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 B4E1Z4 1266 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 RGS20O76081 388 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 RBL2Q08999 1139 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 PTGISQ16647 500 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 TCTN1Q2MV58 587 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 B4GALNT3Q6L9W6 998 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 CWC27Q6UX04 472 aaKnown RBP17.53■□□□□ 0.4
ATG4B-209ENST00000425239 SEPT14Q6ZU15 432 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 CHD1LQ86WJ1 897 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 HERC6Q8IVU3 1022 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 NSUN6Q8TEA1 469 aaKnown RBP17.53■□□□□ 0.4
ATG4B-209ENST00000425239 EMID1Q96A84 441 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-209ENST00000425239 SLC9A7Q96T83 725 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 IL25Q9H293 177 aa17.53■□□□□ 0.4
ATG4B-209ENST00000425239 TCF20Q9UGU0 1960 aaKnown RBP17.53■□□□□ 0.4
ATG4B-209ENST00000425239 B4DLN1 442 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms