RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
SHISA9-201ENST00000423335 CTIFO43310 598 aaKnown RBP16.67■□□□□ 0.26
SHISA9-201ENST00000423335 KRT31Q15323 416 aa16.67■□□□□ 0.26
SHISA9-201ENST00000423335 SLC9C1Q4G0N8 1177 aa16.67■□□□□ 0.26
SHISA9-201ENST00000423335 NEK8Q86SG6 692 aa16.67■□□□□ 0.26
SHISA9-201ENST00000423335 TBCKQ8TEA7 893 aa16.67■□□□□ 0.26
SHISA9-201ENST00000423335 STAG1Q8WVM7 1258 aa16.67■□□□□ 0.26
SHISA9-201ENST00000423335 NUP58Q9BVL2 599 aa16.67■□□□□ 0.26
SHISA9-201ENST00000423335 TSGA10Q9BZW7 698 aa16.67■□□□□ 0.26
SHISA9-201ENST00000423335 LY9Q9HBG7 655 aa16.67■□□□□ 0.26
SHISA9-201ENST00000423335 FAM205CA6NFA0 338 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L15C9J2P7 530 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L13C9JLJ4 530 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L11C9JVI0 530 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L18D6R9N7 530 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L22D6RA61 530 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L17D6RBQ6 530 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L19D6RCP7 530 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L20D6RJB6 530 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 TNNC1P63316 161 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L24Q0WX57 530 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 USP17L6PQ6QN14 398 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 WRNIP1Q96S55 665 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.66■□□□□ 0.26
SHISA9-201ENST00000423335 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
SHISA9-201ENST00000423335 TNS2Q63HR2 1409 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 SMIM22K7EJ46 135 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 INPP5BP32019 993 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 GNGT1P63211 74 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 CETN1Q12798 172 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 CCDC121Q6ZUS5 278 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 PAIP2Q9BPZ3 127 aaKnown RBP16.66■□□□□ 0.26
SHISA9-201ENST00000423335 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 DHX36Q9H2U1 1008 aaKnown RBP16.66■□□□□ 0.26
SHISA9-201ENST00000423335 TRIM49BA6NDI0 452 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 GAS7O60861 476 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
SHISA9-201ENST00000423335 CCT5P48643 541 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 KLHL30Q0D2K2 578 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 NFIAQ12857 509 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
SHISA9-201ENST00000423335 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
SHISA9-201ENST00000423335 CASP8Q14790 479 aa16.65■□□□□ 0.26
SHISA9-201ENST00000423335 DPH6Q7L8W6 267 aa16.65■□□□□ 0.26
SHISA9-201ENST00000423335 ENGASEQ8NFI3 743 aa16.65■□□□□ 0.26
SHISA9-201ENST00000423335 GJC1P36383 396 aa16.65■□□□□ 0.26
SHISA9-201ENST00000423335 FMR1Q06787 632 aaKnown RBP eCLIP16.65■□□□□ 0.26
SHISA9-201ENST00000423335 TTBK2Q6IQ55 1244 aa16.65■□□□□ 0.26
SHISA9-201ENST00000423335 NOP56O00567 594 aaKnown RBP16.65■□□□□ 0.26
SHISA9-201ENST00000423335 SRGNP10124 158 aa16.65■□□□□ 0.26
SHISA9-201ENST00000423335 LRRC41Q15345 812 aa16.65■□□□□ 0.26
SHISA9-201ENST00000423335 PPANQ9NQ55 473 aaKnown RBP16.65■□□□□ 0.26
SHISA9-201ENST00000423335 RNF40O75150 1001 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 CUL4BQ13620 913 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 RASA3Q14644 834 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 HS2ST1Q7LGA3 356 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 ADGRA1Q86SQ6 560 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 CCDC65Q8IXS2 484 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 CNOT6LQ96LI5 555 aaKnown RBP16.64■□□□□ 0.25
SHISA9-201ENST00000423335 ARHGEF35A5YM69 484 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 GCOM1H8Y6P7 765 aaPredicted RBP16.64■□□□□ 0.25
SHISA9-201ENST00000423335 PSMD14O00487 310 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 MYZAPP0CAP1 466 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 SLURP2P0DP57 97 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 ACTN2P35609 894 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 GRIN1Q05586 938 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 POTEAQ6S8J7 498 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 ADAT2Q7Z6V5 191 aaKnown RBP16.64■□□□□ 0.25
SHISA9-201ENST00000423335 CNOT7Q9UIV1 285 aaKnown RBP16.64■□□□□ 0.25
SHISA9-201ENST00000423335 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 MFAP3LO75121 409 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 NDUFA10O95299 355 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 SLC7A5Q01650 507 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 FAM83BQ5T0W9 1011 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 GPATCH4Q5T3I0 446 aaKnown RBP16.64■□□□□ 0.25
SHISA9-201ENST00000423335 C12orf60Q5U649 245 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 FOXP4Q8IVH2 680 aaPredicted RBP16.64■□□□□ 0.25
SHISA9-201ENST00000423335 GOLGA5Q8TBA6 731 aa16.64■□□□□ 0.25
SHISA9-201ENST00000423335 RRP15Q9Y3B9 282 aaKnown RBP16.64■□□□□ 0.25
SHISA9-201ENST00000423335 ANTXR2P58335 489 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 MICALL2Q8IY33 904 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 GSPT2Q8IYD1 628 aaKnown RBP16.63■□□□□ 0.25
SHISA9-201ENST00000423335 SWAP70Q9UH65 585 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 MEIS1O00470 390 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 RASSF7Q02833 373 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 C2orf54Q08AI8 447 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 CFAP221Q4G0U5 840 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 ARHGEF16Q5VV41 709 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 IFT20Q8IY31 132 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 PAF1Q8N7H5 531 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 F5H6K3 240 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 CETN3O15182 167 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 POLR2MP0CAP2 368 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 PCP11498 1178 aaKnown RBP16.63■□□□□ 0.25
SHISA9-201ENST00000423335 KLRC3Q07444 240 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 CDC42EP5Q6NZY7 148 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 STXBP4Q6ZWJ1 553 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 DGKHQ86XP1 1220 aa16.63■□□□□ 0.25
SHISA9-201ENST00000423335 TBC1D5Q92609 795 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms