RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 MAF1Q9H063 256 aa19.43■□□□□ 0.7
CCDC28B-202ENST00000421922 BTBD7Q9P203 1132 aa19.43■□□□□ 0.7
CCDC28B-202ENST00000421922 DDX25Q9UHL0 483 aaKnown RBP19.43■□□□□ 0.7
CCDC28B-202ENST00000421922 RIPK3Q9Y572 518 aa19.43■□□□□ 0.7
CCDC28B-202ENST00000421922 SRPRBQ9Y5M8 271 aaKnown RBP19.43■□□□□ 0.7
CCDC28B-202ENST00000421922 OR52Z1P0C646 297 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 PTPREP23469 700 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 GCLCP48506 637 aaPredicted RBP19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 CCNA1P78396 465 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 CALCRLQ16602 461 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 ARL6IP4Q66PJ3 421 aaKnown RBP19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 PPP4R3AQ6IN85 833 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 MOXD1Q6UVY6 613 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 FAM13BQ9NYF5 915 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 FBXO2Q9UK22 296 aaPredicted RBP19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 TDP2O95551 362 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 CYP2C8P10632 490 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 RPS6P62753 249 aaKnown RBP19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 GHRHRQ02643 423 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 SREBF2Q12772 1141 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 TMEM266Q2M3C6 531 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 CAVIN1Q6NZI2 390 aaKnown RBP19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 DTHD1Q6ZMT9 781 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 ANKRD35Q8N283 1001 aa19.42■□□□□ 0.7
CCDC28B-202ENST00000421922 PFASO15067 1338 aa19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 VWA3AA6NCI4 1184 aa19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 PRPHP41219 470 aa19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 BAATQ14032 418 aaPredicted RBP19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 WDR78Q5VTH9 848 aa19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 SLC30A10Q6XR72 485 aa19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 FAM43AQ8N2R8 423 aa19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 SYTL5Q8TDW5 730 aaPredicted RBP19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 HHIPL1Q96JK4 782 aa19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 CLIC6Q96NY7 704 aa19.41■□□□□ 0.7
CCDC28B-202ENST00000421922 CMA1P23946 247 aa19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 TXLNAP40222 546 aa19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 INHBEP58166 350 aa19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 ERVK-9P63128 1117 aa19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 ERVK-24P63145 666 aa19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 GRM1Q13255 1194 aa19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 ARHGEF16Q5VV41 709 aa19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 ZNF579Q8NAF0 562 aaKnown RBP19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 MOV10L1Q9BXT6 1211 aaKnown RBP19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 RAB34Q9BZG1 259 aa19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 ZCCHC17Q9NP64 241 aaKnown RBP19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 MRVI1Q9Y6F6 885 aa19.4■□□□□ 0.7
CCDC28B-202ENST00000421922 TESPA1A2RU30 521 aaPredicted RBP19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 KINO60870 393 aaKnown RBP19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 CNMDO75829 334 aa19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 CYP3A4P08684 503 aa19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 FAM160A1Q05DH4 1040 aa19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 AXDND1Q5T1B0 1012 aaPredicted RBP19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 GPRC5AQ8NFJ5 357 aa19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 RMDN3Q96TC7 470 aa19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 A1CFQ9NQ94 594 aaKnown RBP19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 CREBZFQ9NS37 354 aa19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 DDX19AQ9NUU7 478 aaKnown RBP19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 RBPJLQ9UBG7 517 aa19.39■□□□□ 0.69
CCDC28B-202ENST00000421922 A0A1B0GVL5 298 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 SLC37A4O43826 429 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 LIG1P18858 919 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 ERCC3P19447 782 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 LONP1P36776 959 aaKnown RBP19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 UBXN2AP68543 259 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 PRR16Q569H4 304 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 CCDC183Q5T5S1 534 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 RESP18Q5W5W9 173 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 GZF1Q9H116 711 aaPredicted RBP19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 CSRNP2Q9H175 543 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 TMEM60Q9H2L4 133 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 MROH8Q9H579 483 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 CYP39A1Q9NYL5 469 aa19.38■□□□□ 0.69
CCDC28B-202ENST00000421922 CYP3A7-CYP3A51PA0A087WV96 503 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 PEX10O60683 326 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 PFKFB1P16118 471 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 EIF2AK2P19525 551 aaKnown RBP19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 CYP3A7P24462 503 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 SETQ01105 290 aaPredicted RBP19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 TAF1CQ15572 869 aaPredicted RBP19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 ANKRD13CQ8N6S4 541 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 C4orf32Q8N8J7 132 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 SHCBP1Q8NEM2 672 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 RASSF8Q8NHQ8 419 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 NSUN6Q8TEA1 469 aaKnown RBP19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 TAAR1Q96RJ0 339 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 TXNRD2Q9NNW7 524 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 DACT1Q9NYF0 836 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 COL20A1Q9P218 1284 aa19.37■□□□□ 0.69
CCDC28B-202ENST00000421922 RPTORQ8N122 1335 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 FOXN1O15353 648 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 CCND2P30279 289 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 CIITAP33076 1130 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 TXKP42681 527 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 SYKP43405 635 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 KCTD2Q14681 263 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 Q4G0T1 1027 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 SHC4Q6S5L8 630 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 SLFN12Q8IYM2 578 aa19.36■□□□□ 0.69
CCDC28B-202ENST00000421922 CRYGNQ8WXF5 182 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms