RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 EPHX3Q9H6B9 360 aa12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 IL17RBQ9NRM6 502 aa12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 ADD3Q9UEY8 706 aaKnown RBP12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 NFIBO00712 420 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 FOXP2O15409 715 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 LPXNO60711 386 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 MYL3P08590 195 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 IQCF3P0C7M6 154 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 GRB10Q13322 594 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 BAATQ14032 418 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 NFRKBQ6P4R8 1299 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 SLC30A10Q6XR72 485 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 OR6J1Q8NGC5 347 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 ARNTL2Q8WYA1 636 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 SEC62Q99442 399 aaKnown RBP12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 HCN4Q9Y3Q4 1203 aa12.08□□□□□ -0.48
TNFAIP3-202ENST00000420009 A6NJR5 290 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 TSPY2A6NKD2 308 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 NMT2O60551 498 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 BAIAP3O94812 1187 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 EDNRBP24530 442 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 PTPN11Q06124 597 aaPredicted RBP12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 LRRFIP1Q32MZ4 808 aaKnown RBP12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 TMEM31Q5JXX7 168 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 ZMYM1Q5SVZ6 1142 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 BTNL9Q6UXG8 535 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 SPRED2Q7Z698 418 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 HLA-CQ95604 372 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 C11orf16Q9NQ32 467 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 RAD50Q92878 1312 aa12.07□□□□□ -0.48
TNFAIP3-202ENST00000420009 PTPRSQ13332 1948 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 NKRFO15226 690 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 KPNA6O60684 536 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 BFSP2Q13515 415 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 CCDC96Q2M329 555 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 IER5LQ5T953 404 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 TTBK2Q6IQ55 1244 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 RETREG2Q8NC44 543 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 PPP1R13LQ8WUF5 828 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 CLEC4DQ8WXI8 215 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 CTAGE1Q96RT6 745 aa12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 GPHNQ9NQX3 736 aaPredicted RBP12.06□□□□□ -0.48
TNFAIP3-202ENST00000420009 LCHNA4D1U4 455 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 KIF28PB7ZC32 967 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 GPR37L1O60883 481 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 SLC16A2P36021 539 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 WDR5P61964 334 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 GPNMBQ14956 572 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 BRDTQ58F21 947 aaPredicted RBP12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 SYDE2Q5VT97 1194 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 PI4K2BQ8TCG2 481 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 SCFD2Q8WU76 684 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 FTOQ9C0B1 505 aaKnown RBP eCLIP12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 LMCD1Q9NZU5 365 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 ANAPC4Q9UJX5 808 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 TET1Q8NFU7 2136 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 TTC41PQ6P2S7 1318 aa12.05□□□□□ -0.48
TNFAIP3-202ENST00000420009 PTPDC1A2A3K4 754 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 ORC4O43929 436 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 FGRP09769 529 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 CALML3P27482 149 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 RPS6P62753 249 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 CTDSPL2Q05D32 466 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 PDE4DQ08499 809 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 RBL2Q08999 1139 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 C20orf194Q5TEA3 1177 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 SESTD1Q86VW0 696 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 DNERQ8NFT8 737 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 CAGE1Q8TC20 777 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 AFAP1L1Q8TED9 768 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 GDPD5Q8WTR4 605 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 COPS5Q92905 334 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 FSD1Q9BTV5 496 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 CD320Q9NPF0 282 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 WDR19Q8NEZ3 1342 aa12.04□□□□□ -0.48
TNFAIP3-202ENST00000420009 RANBP6O60518 1105 aaKnown RBP12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 ARIH2O95376 493 aa12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 KCNJ6P48051 423 aa12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 DEFB103AP81534 67 aa12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 RNF207Q6ZRF8 634 aa12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 CCDC155Q8N6L0 562 aa12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 DHX38Q92620 1227 aaKnown RBP12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 PNMA2Q9UL42 364 aa12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 NOD1Q9Y239 953 aa12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 FRMPD2Q68DX3 1309 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-202ENST00000420009 BRWD1Q9NSI6 2320 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 FAM86C2PA6NEL3 165 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 PI4K2BG5E9Z4 385 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 CXCL10P02778 98 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 TXNP10599 105 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 PDHBP11177 359 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms