RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 TRDNQ13061 729 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 CCDC85BQ15834 202 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-205ENST00000419964 ZNF423Q2M1K9 1284 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 KLHL40Q2TBA0 621 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 SLC9C2Q5TAH2 1124 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 LINC00114Q6XXX2 140 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 SYNE4Q8N205 404 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 SPATA5Q8NB90 893 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 EDC3Q96F86 508 aaKnown RBP8.49□□□□□ -1.05
EPHA4-205ENST00000419964 NOC4LQ9BVI4 516 aaKnown RBP8.49□□□□□ -1.05
EPHA4-205ENST00000419964 SOX17Q9H6I2 414 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-205ENST00000419964 SBF2Q86WG5 1849 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 TAF1LQ8IZX4 1826 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 SOX1O00570 391 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-205ENST00000419964 ZNF213O14771 459 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 FSCN2O14926 492 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 CYP21A2P08686 494 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 RPS8P62241 208 aaKnown RBP8.48□□□□□ -1.05
EPHA4-205ENST00000419964 RAC1P63000 192 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 ST5P78524 1137 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 HMGN5P82970 282 aaKnown RBP8.48□□□□□ -1.05
EPHA4-205ENST00000419964 CHRNDQ07001 517 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 C19orf57Q0VDD7 668 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 FAAP100Q0VG06 881 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 ALX1Q15699 326 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 ADCK5Q3MIX3 580 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 TBC1D9BQ66K14 1250 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 RALYLQ86SE5 291 aaKnown RBP8.48□□□□□ -1.05
EPHA4-205ENST00000419964 VPS37DQ86XT2 251 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
EPHA4-205ENST00000419964 BEND7Q8N7W2 519 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-205ENST00000419964 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 SLC7A3Q8WY07 619 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 SYAP1Q96A49 352 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-205ENST00000419964 NECAB3Q96P71 396 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-205ENST00000419964 NACAP1Q9BZK3 213 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 OSGEPQ9NPF4 335 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 DENND2AQ9ULE3 1009 aa8.48□□□□□ -1.05
EPHA4-205ENST00000419964 GPAA1O43292 621 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 STX6O43752 255 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 FBXO24O75426 580 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 IDH1O75874 414 aaKnown RBP8.47□□□□□ -1.05
EPHA4-205ENST00000419964 MCM5P33992 734 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 RBM6P78332 1123 aaKnown RBP8.47□□□□□ -1.05
EPHA4-205ENST00000419964 TXNDC11Q6PKC3 985 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 ILDR2Q71H61 639 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 NOL8Q76FK4 1167 aaKnown RBP8.47□□□□□ -1.05
EPHA4-205ENST00000419964 HS2ST1Q7LGA3 356 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 CERS3Q8IU89 383 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 CNBD1Q8NA66 436 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 KLHL23Q8NBE8 558 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 NCOA7Q8NI08 942 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 RNF34Q969K3 372 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 OSBP2Q969R2 916 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 ZNF274Q96GC6 653 aaPredicted RBP8.47□□□□□ -1.05
EPHA4-205ENST00000419964 SEC62Q99442 399 aaKnown RBP8.47□□□□□ -1.05
EPHA4-205ENST00000419964 MTA3Q9BTC8 594 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 PLVAPQ9BX97 442 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 CNNM2Q9H8M5 875 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 NOP53Q9NZM5 478 aaKnown RBP8.47□□□□□ -1.05
EPHA4-205ENST00000419964 SAMM50Q9Y512 469 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 DDX49Q9Y6V7 483 aaKnown RBP8.47□□□□□ -1.05
EPHA4-205ENST00000419964 ZNF804BA4D1E1 1349 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 PNPLA7Q6ZV29 1317 aa8.47□□□□□ -1.05
EPHA4-205ENST00000419964 MYH7P12883 1935 aa8.46□□□□□ -1.05
EPHA4-205ENST00000419964 GOLGA6L3A6NEY3 463 aa8.46□□□□□ -1.06
EPHA4-205ENST00000419964 E7EWF7 191 aa8.46□□□□□ -1.06
EPHA4-205ENST00000419964 ZSCAN22P10073 491 aaPredicted RBP8.46□□□□□ -1.06
EPHA4-205ENST00000419964 PDE6AP16499 860 aa8.46□□□□□ -1.06
EPHA4-205ENST00000419964 PHKA1P46020 1223 aa8.46□□□□□ -1.06
EPHA4-205ENST00000419964 FANCCQ00597 558 aa8.46□□□□□ -1.06
EPHA4-205ENST00000419964 SPTY2D1Q68D10 685 aaPredicted RBP8.46□□□□□ -1.06
EPHA4-205ENST00000419964 MCTP1Q6DN14 999 aa8.46□□□□□ -1.06
EPHA4-205ENST00000419964 TRIM11Q96F44 468 aa8.46□□□□□ -1.06
EPHA4-205ENST00000419964 AGXT2Q9BYV1 514 aa8.46□□□□□ -1.06
EPHA4-205ENST00000419964 MINPP1Q9UNW1 487 aa8.46□□□□□ -1.06
EPHA4-205ENST00000419964 DUOX1Q9NRD9 1551 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 FAM181BA6NEQ2 426 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 M0R2C6 588 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 ENC1O14682 589 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 PLSCR1O15162 318 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 PFKFB2O60825 505 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 APPP05067 770 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 PCP11498 1178 aaKnown RBP8.45□□□□□ -1.06
EPHA4-205ENST00000419964 SYT1P21579 422 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 GJB2P29033 226 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 ZNF157P51786 506 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-205ENST00000419964 EVCP57679 992 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 EXOSC10Q01780 885 aaKnown RBP8.45□□□□□ -1.06
EPHA4-205ENST00000419964 GSTM4Q03013 218 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 RASGRF1Q13972 1273 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 TOB2Q14106 344 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-205ENST00000419964 SETDB1Q15047 1291 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 ME3Q16798 604 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 LARP1BQ659C4 914 aaKnown RBP8.45□□□□□ -1.06
EPHA4-205ENST00000419964 CCDC129Q6ZRS4 1044 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 Q6ZUG5 572 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 CCDC83Q8IWF9 413 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 RPGRQ92834 1020 aaKnown RBP8.45□□□□□ -1.06
EPHA4-205ENST00000419964 GTF3C6Q969F1 213 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms