RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 LOXHD1Q8IVV2 1947 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 SLC37A4O43826 429 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 EZH2Q15910 746 aaKnown RBP16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 SYDE2Q5VT97 1194 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 FBXO11Q86XK2 927 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 ZFPM1Q8IX07 1006 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 GUF1Q8N442 669 aaKnown RBP16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 RAD54LQ92698 747 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 GMLQ99445 158 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 ANO3Q9BYT9 981 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 KCNMB3Q9NPA1 279 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 GINM1Q9NU53 330 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 TMEM260Q9NX78 707 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 TRMT1Q9NXH9 659 aaKnown RBP16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 PCDHA12Q9UN75 941 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 GDAQ9Y2T3 454 aa16.28■□□□□ 0.2
HLA-DPA1-242ENST00000419277 MARCH6O60337 910 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TDP2O95551 362 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 NDUFB10O96000 172 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 GRB10Q13322 594 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 DLGAP5Q15398 846 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TTBK2Q6IQ55 1244 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CLEC10AQ8IUN9 316 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ERMNQ8TAM6 284 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ANKRD7Q92527 254 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 KCNQ5Q9NR82 932 aa16.27■□□□□ 0.19
HLA-DPA1-242ENST00000419277 SPDYE3A6NKU9 549 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 YDJCA8MPS7 323 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 SLU7O95391 586 aaKnown RBP16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TUBB2AQ13885 445 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 Q4G0T1 1027 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 FIGNQ5HY92 759 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ARHGAP27Q6ZUM4 889 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CSGALNACT2Q8N6G5 542 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CRYGNQ8WXF5 182 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 FAM20AQ96MK3 541 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TUBB2BQ9BVA1 445 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TDRD3Q9H7E2 651 aaKnown RBP16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 EHMT1Q9H9B1 1298 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 BLOC1S4Q9NUP1 217 aa16.26■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CIITAP33076 1130 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 SREBF1P36956 1147 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 STAT2P52630 851 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 HSP90AA4PQ58FG1 418 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CENPPQ6IPU0 288 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 LARGE2Q8N3Y3 721 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 FBXO41Q8TF61 875 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ZNF592Q92610 1267 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 MYO1AQ9UBC5 1043 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TMX2Q9Y320 296 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 RABGAP1Q9Y3P9 1069 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 PITPNM2Q9BZ72 1349 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TEX33O43247 280 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 C21orf2O43822 256 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 GYPCP04921 128 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 SLC16A2P36021 539 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CACNB3P54284 484 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 EN1Q05925 392 aaPredicted RBP16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TSR1Q2NL82 804 aaKnown RBP16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CYP26C1Q6V0L0 522 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 REXO1L1PQ8IX06 675 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 PDCL2Q8N4E4 241 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ABHD10Q9NUJ1 306 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 DNAI1Q9UI46 699 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 PNMA2Q9UL42 364 aa16.25■□□□□ 0.19
HLA-DPA1-242ENST00000419277 BRCA1P38398 1863 aaKnown RBP16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 FER1L6Q2WGJ9 1857 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 GH2P01242 217 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CYP3A4P08684 503 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TGFB2P61812 414 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TUBB4BP68371 445 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 EHHADHQ08426 723 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 RBL2Q08999 1139 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 UBE2SQ16763 222 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 FAM160B2Q86V87 743 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 SIAH1Q8IUQ4 282 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 NIM1KQ8IY84 436 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 HAS1Q92839 578 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 PNMA5Q96PV4 448 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 TSG101Q99816 390 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CGNQ9P2M7 1197 aaKnown RBP16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ZNRF3Q9ULT6 936 aa16.24■□□□□ 0.19
HLA-DPA1-242ENST00000419277 MEIS2O14770 477 aa16.23■□□□□ 0.19
HLA-DPA1-242ENST00000419277 MUTP22033 750 aa16.23■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CCT6AP40227 531 aaKnown RBP16.23■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ADKP55263 362 aaKnown RBP16.23■□□□□ 0.19
HLA-DPA1-242ENST00000419277 UBXN1Q04323 297 aa16.23■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ZNF70Q9UC06 446 aaPredicted RBP16.23■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ATAD5Q96QE3 1844 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 A0A1W2PQJ5 194 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 POTEMA6NI47 508 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 EDIL3O43854 480 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 CASP14P31944 242 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 ARHGAP4P98171 946 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 MAP3K10Q02779 954 aa16.22■□□□□ 0.19
HLA-DPA1-242ENST00000419277 IKQ13123 557 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms