RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 GPCPD1Q9NPB8 672 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 SMARCAL1Q9NZC9 954 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 LDHCP07864 332 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 SLURP2P0DP57 97 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 CAPN2P17655 700 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 CXCR5P32302 372 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 AMPD3Q01432 767 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 RAD51AP2Q09MP3 1159 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 KIF5AQ12840 1032 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 MFSD14BQ5SR56 506 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 FKBP15Q5T1M5 1219 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 RC3H1Q5TC82 1133 aaKnown RBP16.13■□□□□ 0.17
HDAC9-208ENST00000417496 CNNM4Q6P4Q7 775 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 NDST4Q9H3R1 872 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 CCDC88AQ3V6T2 1871 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 RHBDL3P58872 404 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 CENPPQ6IPU0 288 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 MTMR9Q96QG7 549 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 ERGIC2Q96RQ1 377 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 GPR75-ASB3A0A0A6YYF3 556 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 PDHBP11177 359 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 EZH2Q15910 746 aaKnown RBP16.12■□□□□ 0.17
HDAC9-208ENST00000417496 ECM1Q16610 540 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 UBE2SQ16763 222 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 VWA3BQ502W6 1294 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 HSP90B2PQ58FF3 399 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 FAM114A1Q8IWE2 563 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 CCDC170Q8IYT3 715 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 COG1Q8WTW3 980 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 HDAC7Q8WUI4 952 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 SECISBP2LQ93073 1101 aaKnown RBP16.12■□□□□ 0.17
HDAC9-208ENST00000417496 GBP3Q9H0R5 595 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 KANSL2Q9H9L4 492 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 ZNF287Q9HBT7 754 aa16.12■□□□□ 0.17
HDAC9-208ENST00000417496 F8W031 263 aaPredicted RBP16.11■□□□□ 0.17
HDAC9-208ENST00000417496 MOCS3O95396 460 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 EIF4A3P38919 411 aaKnown RBP16.11■□□□□ 0.17
HDAC9-208ENST00000417496 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
HDAC9-208ENST00000417496 SPA17Q15506 151 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 FOXR1Q6PIV2 292 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 RRAGAQ7L523 313 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 LARP4BQ92615 738 aaKnown RBP16.11■□□□□ 0.17
HDAC9-208ENST00000417496 CDK5RAP3Q96JB5 506 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 IFIH1Q9BYX4 1025 aaKnown RBP16.11■□□□□ 0.17
HDAC9-208ENST00000417496 MAGEF1Q9HAY2 307 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 EHD2Q9NZN4 543 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 LCMT1Q9UIC8 334 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 TNNI2P48788 182 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 VAV2P52735 878 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 DDX12PQ92771 950 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 NGLY1Q96IV0 654 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 TBC1D7Q9P0N9 293 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 PLAGL2Q9UPG8 496 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 SIK3Q9Y2K2 1263 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 PCDHA13Q9Y5I0 950 aa16.11■□□□□ 0.17
HDAC9-208ENST00000417496 NRAPQ86VF7 1730 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 LRRC53A6NM62 1247 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 SYF2O95926 243 aaKnown RBP16.1■□□□□ 0.17
HDAC9-208ENST00000417496 EHBP1Q8NDI1 1231 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 SNX29Q8TEQ0 813 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 FAM204AQ9H8W3 233 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 SALL4Q9UJQ4 1053 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 SLC16A2P36021 539 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 KIF11P52732 1056 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 APBA1Q02410 837 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 TRAPPC3LQ5T215 181 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 TTBK2Q6IQ55 1244 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 FAM196AQ6ZSG2 479 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 PURBQ96QR8 312 aaKnown RBP16.1■□□□□ 0.17
HDAC9-208ENST00000417496 DEF6Q9H4E7 631 aa16.1■□□□□ 0.17
HDAC9-208ENST00000417496 TNRC6CQ9HCJ0 1690 aaKnown RBP16.09■□□□□ 0.17
HDAC9-208ENST00000417496 NCK2O43639 380 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 ACTN2P35609 894 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 SKIDA1Q1XH10 827 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 CREG2Q8IUH2 290 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 RPGRQ92834 1020 aaKnown RBP16.09■□□□□ 0.17
HDAC9-208ENST00000417496 FGFBP2Q9BYJ0 223 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 TANGO6Q9C0B7 1094 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 PLEKHA4Q9H4M7 779 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 RIOX1Q9H6W3 641 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 PSD3Q9NYI0 1048 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 POLLQ9UGP5 575 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 AKR1B10O60218 316 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 RNF40O75150 1001 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 SSBP05455 408 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDAC9-208ENST00000417496 AKR1B1P15121 316 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 ADCY7P51828 1080 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 SLC7A5Q01650 507 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
HDAC9-208ENST00000417496 GFPT1Q06210 699 aaPredicted RBP16.09■□□□□ 0.17
HDAC9-208ENST00000417496 PRR5LQ6MZQ0 368 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 NFRKBQ6P4R8 1299 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 ZNF662Q6ZS27 426 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 UNC13DQ70J99 1090 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 NLRC4Q9NPP4 1024 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 MTMR4Q9NYA4 1195 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 HPCAL4Q9UM19 191 aa16.09■□□□□ 0.17
HDAC9-208ENST00000417496 AHDC1Q5TGY3 1603 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms