RNA–Protein interactions for RNA: ENST00000417036.1

THUMPD3-203, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-203ENST00000417036 SPC25Q9HBM1 224 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 CTDP1Q9Y5B0 961 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 BDP1A6H8Y1 2624 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 BAZ2BQ9UIF8 2168 aaKnown RBP16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 GRXCR1A8MXD5 290 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 TNFRSF10AO00220 468 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 PLEKHA8P1O95397 391 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 ASGR1P07306 291 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 PARP1P09874 1014 aaKnown RBP16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 CALM1P0DP23 149 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 CALM2P0DP24 149 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 CALM3P0DP25 149 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 BMP3P12645 472 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 PBX2P40425 430 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 CDK7P50613 346 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 RCAN1P53805 252 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 TMEM240Q5SV17 173 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 NECAB1Q8N987 351 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 PRPF38AQ8NAV1 312 aaKnown RBP16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 PPM1EQ8WY54 764 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 GTF3C6Q969F1 213 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 PBX4Q9BYU1 374 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 CPVLQ9H3G5 476 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 GPCPD1Q9NPB8 672 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 REV3LO60673 3130 aa16.03■□□□□ 0.16
THUMPD3-203ENST00000417036 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 ARVCFO00192 962 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 TLR3O15455 904 aaKnown RBP16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 ADCY6O43306 1168 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 PFKFB2O60825 505 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 ZBED4O75132 1171 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 CSF2RAP15509 400 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 CDC27P30260 824 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 SCRN1Q12765 414 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 ASPRV1Q53RT3 343 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 GNASQ5JWF2 1037 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 PSRC1Q6PGN9 363 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 C16orf59Q7L2K0 433 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 ANKRD35Q8N283 1001 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 TMEM199Q8N511 208 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 KIFC2Q96AC6 838 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 ZNF274Q96GC6 653 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 TMX3Q96JJ7 454 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 PPP1R12CQ9BZL4 782 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 UPF3AQ9H1J1 476 aaKnown RBP16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 SLKQ9H2G2 1235 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 ABHD16BQ9H3Z7 469 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 PRDM12Q9H4Q4 367 aa16.02■□□□□ 0.16
THUMPD3-203ENST00000417036 CNTNAP5Q8WYK1 1306 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 TCF20Q9UGU0 1960 aaKnown RBP16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 K7ELQ4 463 aaPredicted RBP16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 ATP2A1O14983 1001 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 DTNBO60941 627 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 ACRP10323 421 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 KIF5BP33176 963 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 MCM2P49736 904 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 GJA9P57773 515 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 IKQ13123 557 aaPredicted RBP16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 RASIP1Q5U651 963 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 TTBK2Q6IQ55 1244 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 TMTC3Q6ZXV5 915 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 ARMCX2Q7L311 632 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 CCDC83Q8IWF9 413 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 FAM126BQ8IXS8 530 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 CMTR1Q8N1G2 835 aaKnown RBP16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 FANCBQ8NB91 859 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 IL27Q8NEV9 243 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 SNX21Q969T3 373 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 FGD4Q96M96 766 aa16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 RAVER2Q9HCJ3 691 aaKnown RBP16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 SH2B1Q9NRF2 756 aaPredicted RBP16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 FAM217BQ9NTX9 383 aaPredicted RBP16.01■□□□□ 0.15
THUMPD3-203ENST00000417036 TRANK1O15050 2925 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
THUMPD3-203ENST00000417036 TMEM232C9JQI7 657 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 PPFIA3O75145 1194 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 SLC16A2P36021 539 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
THUMPD3-203ENST00000417036 SLC35G1Q2M3R5 365 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 GPATCH4Q5T3I0 446 aaKnown RBP16■□□□□ 0.15
THUMPD3-203ENST00000417036 ZNF365Q70YC5 407 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 ZSCAN31Q96LW9 406 aaPredicted RBP16■□□□□ 0.15
THUMPD3-203ENST00000417036 MAP3K14Q99558 947 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 SLC38A10Q9HBR0 1119 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 RBM28Q9NW13 759 aaKnown RBP16■□□□□ 0.15
THUMPD3-203ENST00000417036 THEGQ9P2T0 379 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 FBXO40Q9UH90 709 aa16■□□□□ 0.15
THUMPD3-203ENST00000417036 COL9A1P20849 921 aa15.99■□□□□ 0.15
THUMPD3-203ENST00000417036 CYP2C18P33260 490 aa15.99■□□□□ 0.15
THUMPD3-203ENST00000417036 ADD1P35611 737 aaKnown RBP15.99■□□□□ 0.15
THUMPD3-203ENST00000417036 STAT2P52630 851 aa15.99■□□□□ 0.15
THUMPD3-203ENST00000417036 RAB30Q15771 203 aa15.99■□□□□ 0.15
THUMPD3-203ENST00000417036 CHST13Q8NET6 341 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms