RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 COPRSQ9NQ92 184 aa6.44□□□□□ -1.38
ATG4AP1-201ENST00000416893 KCNQ5Q9NR82 932 aa6.44□□□□□ -1.38
ATG4AP1-201ENST00000416893 KIF24Q5T7B8 1368 aa6.44□□□□□ -1.38
ATG4AP1-201ENST00000416893 HTR3BO95264 441 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 HSP90AB2PQ58FF8 381 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 FBXL19Q6PCT2 694 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 CDH24Q86UP0 819 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 METTL16Q86W50 562 aaKnown RBP6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 LRRC56Q8IYG6 542 aaPredicted RBP6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 PIWIL2Q8TC59 973 aaKnown RBP6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 RNF34Q969K3 372 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 LRRC3Q9BY71 257 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 ZSWIM5Q9P217 1185 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 POLKQ9UBT6 870 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 REV1Q9UBZ9 1251 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 CEP131Q9UPN4 1083 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 UTRNP46939 3433 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 SBF2Q86WG5 1849 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 INSRP06213 1382 aa6.43□□□□□ -1.38
ATG4AP1-201ENST00000416893 TNS2Q63HR2 1409 aa6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 SMG6Q86US8 1419 aaKnown RBP6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 PPM1GO15355 546 aaPredicted RBP6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 C1QTNF9P0C862 333 aa6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 TNK2Q07912 1038 aa6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 MORC1Q86VD1 984 aa6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 FBXO15Q8NCQ5 510 aaPredicted RBP6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 DNAJB8Q8NHS0 232 aa6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 DIRC2Q96SL1 478 aa6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 NSUN3Q9H649 340 aaKnown RBP6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 SLAMF8Q9P0V8 285 aa6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 NPC1L1Q9UHC9 1359 aa6.42□□□□□ -1.38
ATG4AP1-201ENST00000416893 NFIBO00712 420 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 GRIN3BO60391 1043 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 KRT1P04264 644 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 GARTP22102 1010 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 TNNI2P48788 182 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 CHMP4BP1P59074 171 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 HDLBPQ00341 1268 aaKnown RBP6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 DDB1Q16531 1140 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 CC2D1BQ5T0F9 858 aaKnown RBP6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 NBPF6Q5VWK0 638 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 LCNL1Q6ZST4 164 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 TTC6Q86TZ1 520 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 USHBP1Q8N6Y0 703 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 ABHD4Q8TB40 342 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 ZNF296Q8WUU4 475 aaPredicted RBP6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 NBPF4Q96M43 638 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 KLHL3Q9UH77 587 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 KCNH3Q9ULD8 1083 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 POLR3KQ9Y2Y1 108 aaPredicted RBP6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 TNS1Q9HBL0 1735 aaKnown RBP6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 OVOS2A0A0G2JMS6 1433 aa6.41□□□□□ -1.38
ATG4AP1-201ENST00000416893 MEGF6O75095 1541 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 RGPD1P0DJD0 1748 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 UPK3BL1B0FP48 263 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 UPK3BL2E5RIL1 263 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 E9PSI1 815 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 RBAK-RBAKDNI3L0D1 243 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 TLR3O15455 904 aaKnown RBP6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 GREM1O60565 184 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 IL2RBP14784 551 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 RAC2P15153 192 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 CNGB1Q14028 1251 aaPredicted RBP6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 MARCH10Q8NA82 808 aaPredicted RBP6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 FBXO27Q8NI29 283 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 CCDC74BQ96LY2 380 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 TRIT1Q9H3H1 467 aaKnown RBP6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 IGSF5Q9NSI5 407 aa6.4□□□□□ -1.38
ATG4AP1-201ENST00000416893 NCAPD2Q15021 1401 aa6.4□□□□□ -1.39
ATG4AP1-201ENST00000416893 SHANK3Q9BYB0 1731 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 DNAJC25-GNG10A0A024R161 153 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 EXOC5O00471 708 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 ESR1P03372 595 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 APOBRQ0VD83 1088 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 EIF4A2Q14240 407 aaKnown RBP6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 TMPRSS7Q7RTY8 843 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 USP48Q86UV5 1035 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 SIAH1Q8IUQ4 282 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 PHACTR4Q8IZ21 702 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 PPP1R13LQ8WUF5 828 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 RNF141Q8WVD5 230 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 GPATCH2Q9NW75 528 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 DDX41Q9UJV9 622 aaKnown RBP6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 BCL9O00512 1426 aa6.39□□□□□ -1.39
ATG4AP1-201ENST00000416893 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 ATE1O95260 518 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 ZSCAN22P10073 491 aaPredicted RBP6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 TCF3P15923 654 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 RACK1P63244 317 aaKnown RBP6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 ZNF394Q53GI3 561 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 RALGPS1Q5JS13 557 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 DEFB132Q7Z7B7 95 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 NT5DC4Q86YG4 428 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 RAPGEF4Q8WZA2 1011 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 ASPNQ9BXN1 380 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 EPB41L4BQ9H329 900 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 BRMS1Q9HCU9 246 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 DCP1AQ9NPI6 582 aaPredicted RBP6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 GMIPQ9P107 970 aa6.38□□□□□ -1.39
ATG4AP1-201ENST00000416893 ADAMTS1Q9UHI8 967 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms