RNA–Protein interactions for RNA: ENST00000413689.5

SCN5A-203, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN5A, Length 8,504 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-203ENST00000413689 E2F5Q15329 346 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 CABP7Q86V35 215 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 U2AF1L4Q8WU68 220 aaKnown RBP11.3□□□□□ -0.6
SCN5A-203ENST00000413689 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
SCN5A-203ENST00000413689 CSRNP1Q96S65 589 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 C19orf44Q9H6X5 657 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 HNRNPH2P55795 449 aaKnown RBP11.3□□□□□ -0.6
SCN5A-203ENST00000413689 GABPAQ06546 454 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 CUL1Q13616 776 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 TEX11Q8IYF3 940 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
SCN5A-203ENST00000413689 NSFL1CQ9UNZ2 370 aaKnown RBP11.3□□□□□ -0.6
SCN5A-203ENST00000413689 P4HA1P13674 534 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 SLC39A14Q15043 492 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 C10orf76Q5T2E6 689 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 UPF3AQ9H1J1 476 aaKnown RBP11.3□□□□□ -0.6
SCN5A-203ENST00000413689 OSBPL3Q9H4L5 887 aa11.3□□□□□ -0.6
SCN5A-203ENST00000413689 PDE6BP35913 854 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 IFNAR2P48551 515 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 APLFQ8IW19 511 aaPredicted RBP11.29□□□□□ -0.6
SCN5A-203ENST00000413689 NGLY1Q96IV0 654 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 SOWAHDA6NJG2 315 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 PPP6R2O75170 966 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 ATF7P17544 494 aaPredicted RBP11.29□□□□□ -0.6
SCN5A-203ENST00000413689 CUL4AQ13619 759 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 HOXC9P31274 260 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 FOXP1Q9H334 677 aaPredicted RBP11.29□□□□□ -0.6
SCN5A-203ENST00000413689 STAP2Q9UGK3 403 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 PRDM1O75626 825 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 ATF2P15336 505 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 SLC1A4P43007 532 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 RBL2Q08999 1139 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 IP6K1Q92551 441 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 SAP30BPQ9UHR5 308 aaKnown RBP11.29□□□□□ -0.6
SCN5A-203ENST00000413689 MAPK13O15264 365 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 SP4Q02446 784 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 CNPY4Q8N129 248 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 ATP8A1Q9Y2Q0 1164 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 PGRMC1O00264 195 aaKnown RBP11.29□□□□□ -0.6
SCN5A-203ENST00000413689 RWDD2BP57060 319 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 LRRC8BQ6P9F7 803 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 ADAT2Q7Z6V5 191 aaKnown RBP11.29□□□□□ -0.6
SCN5A-203ENST00000413689 LPIN2Q92539 896 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 HINFPQ9BQA5 517 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 MAP1BP46821 2468 aaKnown RBP11.29□□□□□ -0.6
SCN5A-203ENST00000413689 ASXL2Q76L83 1435 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 HEXIM1O94992 359 aaKnown RBP11.29□□□□□ -0.6
SCN5A-203ENST00000413689 CXCR5P32302 372 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 EEF2KMTQ96G04 330 aa11.29□□□□□ -0.6
SCN5A-203ENST00000413689 ZSCAN10Q96SZ4 725 aaPredicted RBP11.29□□□□□ -0.6
SCN5A-203ENST00000413689 KRT10P13645 584 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 KPNA2P52292 529 aaKnown RBP11.28□□□□□ -0.6
SCN5A-203ENST00000413689 NNTQ13423 1086 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 GALNT17Q6IS24 598 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 VSTM4Q8IW00 320 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 TRMT2AQ8IZ69 625 aaKnown RBP11.28□□□□□ -0.6
SCN5A-203ENST00000413689 CNOT6LQ96LI5 555 aaKnown RBP11.28□□□□□ -0.6
SCN5A-203ENST00000413689 ADCY10Q96PN6 1610 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 ARHGAP44Q17R89 818 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 PDZD4Q76G19 769 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-203ENST00000413689 KLHL29Q96CT2 875 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 N4BP1O75113 896 aaKnown RBP11.28□□□□□ -0.6
SCN5A-203ENST00000413689 APOA1P02647 267 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCN5A-203ENST00000413689 PDIA3P30101 505 aaKnown RBP11.28□□□□□ -0.6
SCN5A-203ENST00000413689 ANKRD35Q8N283 1001 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 NBPF3Q9H094 633 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 MAGI2Q86UL8 1455 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 PTPROQ16827 1216 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 NCAPH2Q6IBW4 605 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 CATSPER1Q8NEC5 780 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 CUEDC2Q9H467 287 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 PCDHA5Q9Y5H7 936 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 LAD1O00515 517 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 GNGT2O14610 69 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 FGAP02671 866 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 CHGBP05060 677 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 MYL1P05976 194 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 BLIDQ8IZY5 108 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 CLIC6Q96NY7 704 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 PKD2L1Q9P0L9 805 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 PCDHA12Q9UN75 941 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 IQGAP3Q86VI3 1631 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-203ENST00000413689 PYGBP11216 843 aa11.28□□□□□ -0.6
SCN5A-203ENST00000413689 PPP1R2P3Q6NXS1 205 aa11.27□□□□□ -0.6
SCN5A-203ENST00000413689 ZC3H18Q86VM9 953 aaKnown RBP11.27□□□□□ -0.6
SCN5A-203ENST00000413689 GPBP1Q86WP2 473 aa11.27□□□□□ -0.6
SCN5A-203ENST00000413689 ARHGEF10LQ9HCE6 1279 aa11.27□□□□□ -0.6
SCN5A-203ENST00000413689 PANK4Q9NVE7 773 aa11.27□□□□□ -0.6
SCN5A-203ENST00000413689 HNRNPCL2B2RXH8 293 aa11.27□□□□□ -0.6
SCN5A-203ENST00000413689 HNRNPCL1O60812 293 aaKnown RBP11.27□□□□□ -0.6
SCN5A-203ENST00000413689 SERPINB2P05120 415 aa11.27□□□□□ -0.6
SCN5A-203ENST00000413689 ADCK5Q3MIX3 580 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms