RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 RNF214Q8ND24 703 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 TRIM44Q96DX7 344 aaPredicted RBP19.58■□□□□ 0.73
PTPRC-206ENST00000413409 MAP3K14Q99558 947 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 LRFN3Q9BTN0 628 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 GJB4Q9NTQ9 266 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 PI4KBQ9UBF8 816 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 TSPY2A6NKD2 308 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 SEPT4O43236 478 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 PRPF3O43395 683 aaKnown RBP19.57■□□□□ 0.72
PTPRC-206ENST00000413409 POLR3DP05423 398 aaPredicted RBP19.57■□□□□ 0.72
PTPRC-206ENST00000413409 BMP1P13497 986 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 GNL2Q13823 731 aaKnown RBP19.57■□□□□ 0.72
PTPRC-206ENST00000413409 HS1BP3Q53T59 392 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 PRAMEF19Q5SWL8 479 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 TMTC3Q6ZXV5 915 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 TEX11Q8IYF3 940 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 FSIP1Q8NA03 581 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 ENGASEQ8NFI3 743 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.57■□□□□ 0.72
PTPRC-206ENST00000413409 PBX4Q9BYU1 374 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 FOXP1Q9H334 677 aaPredicted RBP19.57■□□□□ 0.72
PTPRC-206ENST00000413409 ZNF287Q9HBT7 754 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 TCP11L1Q9NUJ3 509 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 ZBTB21Q9ULJ3 1066 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 PCDHA7Q9UN72 937 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 CLIC4Q9Y696 253 aa19.57■□□□□ 0.72
PTPRC-206ENST00000413409 PPP6R2O75170 966 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 RAG1P15918 1043 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 AKAP17AQ02040 695 aaKnown RBP19.56■□□□□ 0.72
PTPRC-206ENST00000413409 TYRO3Q06418 890 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 SF3A1Q15459 793 aaKnown RBP19.56■□□□□ 0.72
PTPRC-206ENST00000413409 FAM47AQ5JRC9 791 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 OLFML2BQ68BL8 750 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L2Q6R6M4 530 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 METTL16Q86W50 562 aaKnown RBP19.56■□□□□ 0.72
PTPRC-206ENST00000413409 DGKHQ86XP1 1220 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 GOLPH3LQ9H4A5 285 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 EPHX3Q9H6B9 360 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 FLT1P17948 1338 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 CNTNAP5Q8WYK1 1306 aa19.56■□□□□ 0.72
PTPRC-206ENST00000413409 MYH1P12882 1939 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 KINO60870 393 aaKnown RBP19.55■□□□□ 0.72
PTPRC-206ENST00000413409 CAVIN2O95810 425 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 XBP1P17861 261 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 EVX2Q03828 476 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 SLC39A14Q15043 492 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 C16orf59Q7L2K0 433 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 NOSTRINQ8IVI9 506 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 CTCFLQ8NI51 663 aaPredicted RBP19.55■□□□□ 0.72
PTPRC-206ENST00000413409 TGFBRAP1Q8WUH2 860 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.55■□□□□ 0.72
PTPRC-206ENST00000413409 PHF24Q9UPV7 400 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 MORC2Q9Y6X9 1032 aaPredicted RBP19.55■□□□□ 0.72
PTPRC-206ENST00000413409 IVNS1ABPQ9Y6Y0 642 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 MUC6Q6W4X9 2439 aa19.55■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L15C9J2P7 530 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L13C9JLJ4 530 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L11C9JVI0 530 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L18D6R9N7 530 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L22D6RA61 530 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L17D6RBQ6 530 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L19D6RCP7 530 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L20D6RJB6 530 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 GUCY1A2P33402 732 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 USP17L24Q0WX57 530 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 SNW1Q13573 536 aaKnown RBP19.54■□□□□ 0.72
PTPRC-206ENST00000413409 CATSPERGQ6ZRH7 1159 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 DIS3L2Q8IYB7 885 aaKnown RBP19.54■□□□□ 0.72
PTPRC-206ENST00000413409 FAM200AQ8TCP9 573 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 C12orf42Q96LP6 360 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 PLXNA1Q9UIW2 1896 aa19.54■□□□□ 0.72
PTPRC-206ENST00000413409 PQBP1O60828 265 aaKnown RBP19.53■□□□□ 0.72
PTPRC-206ENST00000413409 COBLO75128 1261 aa19.53■□□□□ 0.72
PTPRC-206ENST00000413409 KIF5BP33176 963 aa19.53■□□□□ 0.72
PTPRC-206ENST00000413409 PTPAQ15257 358 aa19.53■□□□□ 0.72
PTPRC-206ENST00000413409 ZYXQ15942 572 aaKnown RBP19.53■□□□□ 0.72
PTPRC-206ENST00000413409 RCSD1Q6JBY9 416 aa19.53■□□□□ 0.72
PTPRC-206ENST00000413409 C16orf86Q6ZW13 317 aa19.53■□□□□ 0.72
PTPRC-206ENST00000413409 MAPKAPK5Q8IW41 473 aa19.53■□□□□ 0.72
PTPRC-206ENST00000413409 FMR1NBQ8N0W7 255 aaPredicted RBP19.53■□□□□ 0.72
PTPRC-206ENST00000413409 TMEM39AQ9NV64 488 aa19.53■□□□□ 0.72
PTPRC-206ENST00000413409 MRVI1Q9Y6F6 885 aa19.53■□□□□ 0.72
PTPRC-206ENST00000413409 PLIN4Q96Q06 1357 aa19.53■□□□□ 0.72
PTPRC-206ENST00000413409 FAM237AA0A1B0GTK4 181 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 PLEKHA8P1O95397 391 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 IGFBP4P22692 258 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 CMA1P23946 247 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 ADORA2AP29274 412 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 TFAP4Q01664 338 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 TFF2Q03403 129 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 FAAP100Q0VG06 881 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 CAMK4Q16566 473 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 RILPL1Q5EBL4 403 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 AXDND1Q5T1B0 1012 aaPredicted RBP19.52■□□□□ 0.72
PTPRC-206ENST00000413409 RASIP1Q5U651 963 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 LBX2Q6XYB7 198 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 DPP9Q86TI2 863 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 DHX36Q9H2U1 1008 aaKnown RBP19.52■□□□□ 0.72
PTPRC-206ENST00000413409 KAT14Q9H8E8 782 aa19.52■□□□□ 0.72
PTPRC-206ENST00000413409 MKNK2Q9HBH9 465 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms