RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 ZNF865P0CJ78 1059 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 CCND3P30281 292 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 PRAMEF19Q5SWL8 479 aa17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 USP17L6PQ6QN14 398 aa17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 FAM177A1Q8N128 213 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 NSUN7Q8NE18 718 aaKnown RBP17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 CUL5Q93034 780 aa17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 IWS1Q96ST2 819 aa17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 KATNBL1Q9H079 304 aa17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 ZMYND12Q9H0C1 365 aa17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 PXMP2Q9NR77 195 aa17.75■□□□□ 0.43
TRAPPC12-203ENST00000411973 SMCO2A6NFE2 343 aa17.74■□□□□ 0.43
TRAPPC12-203ENST00000411973 MYCP01106 439 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC12-203ENST00000411973 ACVR2BQ13705 512 aa17.74■□□□□ 0.43
TRAPPC12-203ENST00000411973 SMARCC2Q8TAQ2 1214 aa17.74■□□□□ 0.43
TRAPPC12-203ENST00000411973 LLPHQ9BRT6 129 aaKnown RBP17.74■□□□□ 0.43
TRAPPC12-203ENST00000411973 FRMPD4Q14CM0 1322 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 CCDC85CA6NKD9 419 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 SEPT4O43236 478 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 MSCO60682 206 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 FDPSP14324 419 aaKnown RBP17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 CAPN2P17655 700 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 ADCY7P51828 1080 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 ARHGEF16Q5VV41 709 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 FCHSD1Q86WN1 690 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 CCDC148Q8NFR7 591 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 SHISA4Q96DD7 197 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 TMX3Q96JJ7 454 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 PDCD2LQ9BRP1 358 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 VTA1Q9NP79 307 aa17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 ORC3Q9UBD5 711 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC12-203ENST00000411973 EIF2AK2P19525 551 aaKnown RBP17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 GNA11P29992 359 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 GJA8P48165 433 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 CLK2P49760 499 aaKnown RBP17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 PDE4DQ08499 809 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 LHX8Q68G74 356 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 CCDC83Q8IWF9 413 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 WASF1Q92558 559 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 DEFB118Q96PH6 123 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 CRISPLD2Q9H0B8 497 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 C6orf50Q9HD87 102 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 VPS54Q9P1Q0 977 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 DDX20Q9UHI6 824 aaKnown RBP17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 DDX49Q9Y6V7 483 aaKnown RBP17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 KIAA1217Q5T5P2 1943 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 FRMPD3Q5JV73 1810 aa17.72■□□□□ 0.43
TRAPPC12-203ENST00000411973 SGPL1O95470 568 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 FOSP01100 380 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 NR3C2P08235 984 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 CNGA1P29973 690 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 PGM5Q15124 567 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 STXBP2Q15833 593 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 UBE2SQ16763 222 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 TAPT1Q6NXT6 567 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 VSIG10LQ86VR7 867 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 U2AF1L4Q8WU68 220 aaKnown RBP17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 AIFM3Q96NN9 605 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 ZHX1Q9UKY1 873 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 FAM184BQ9ULE4 1060 aa17.71■□□□□ 0.43
TRAPPC12-203ENST00000411973 RBM47A0AV96 593 aaKnown RBP17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 SPDYE3A6NKU9 549 aa17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 JAK2O60674 1132 aa17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 EIF3JO75822 258 aaKnown RBP17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 AKR1A1P14550 325 aa17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 AP3B2Q13367 1082 aa17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 CCDC144BQ3MJ40 725 aa17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 MCTP2Q6DN12 878 aa17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 GALNT17Q6IS24 598 aa17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 FBXO16Q8IX29 292 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 BICD2Q8TD16 824 aa17.7■□□□□ 0.42
TRAPPC12-203ENST00000411973 POTEFA5A3E0 1075 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 DTNBO60941 627 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 XBP1P17861 261 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 IQSEC1Q6DN90 963 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 XRRA1Q6P2D8 792 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 EEPD1Q7L9B9 569 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 IL31RAQ8NI17 732 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 ALG1Q9BT22 464 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 OGDHLQ9ULD0 1010 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 PCDHA6Q9UN73 950 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 PCDHA8Q9Y5H6 950 aa17.69■□□□□ 0.42
TRAPPC12-203ENST00000411973 STAM2O75886 525 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 CCND2P30279 289 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 NLRP5P59047 1200 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 NPY5RQ15761 445 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 PCNX4Q63HM2 1172 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 REXO1Q8N1G1 1221 aaKnown RBP17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 DAGLBQ8NCG7 672 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 PHF20Q9BVI0 1012 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 EHMT1Q9H9B1 1298 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 PDGFCQ9NRA1 345 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 PCDHA4Q9UN74 947 aa17.68■□□□□ 0.42
TRAPPC12-203ENST00000411973 ADAMTS3O15072 1205 aa17.67■□□□□ 0.42
TRAPPC12-203ENST00000411973 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
TRAPPC12-203ENST00000411973 RARBP10826 455 aa17.67■□□□□ 0.42
TRAPPC12-203ENST00000411973 MYCLP12524 364 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC12-203ENST00000411973 ADCYAP1R1P41586 468 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms