RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 PXMP2Q9NR77 195 aa18.85■□□□□ 0.61
NOD1-202ENST00000411552 PDRG1Q9NUG6 133 aa18.85■□□□□ 0.61
NOD1-202ENST00000411552 CCDC196A0A1B0GTZ2 297 aa18.84■□□□□ 0.61
NOD1-202ENST00000411552 PDIA3P30101 505 aaKnown RBP18.84■□□□□ 0.61
NOD1-202ENST00000411552 ARHGEF16Q5VV41 709 aa18.84■□□□□ 0.61
NOD1-202ENST00000411552 IQSEC1Q6DN90 963 aa18.84■□□□□ 0.61
NOD1-202ENST00000411552 HEATR3Q7Z4Q2 680 aa18.84■□□□□ 0.61
NOD1-202ENST00000411552 RNF180Q86T96 592 aa18.84■□□□□ 0.61
NOD1-202ENST00000411552 DPF3Q92784 378 aa18.84■□□□□ 0.61
NOD1-202ENST00000411552 IWS1Q96ST2 819 aa18.84■□□□□ 0.61
NOD1-202ENST00000411552 SENP6Q9GZR1 1112 aaPredicted RBP18.84■□□□□ 0.61
NOD1-202ENST00000411552 V9GY48 417 aaPredicted RBP18.84■□□□□ 0.61
NOD1-202ENST00000411552 MYADML2A6NDP7 307 aa18.83■□□□□ 0.6
NOD1-202ENST00000411552 SMPD1P17405 629 aa18.83■□□□□ 0.6
NOD1-202ENST00000411552 EIF2AK2P19525 551 aaKnown RBP18.83■□□□□ 0.6
NOD1-202ENST00000411552 PTGS1P23219 599 aa18.83■□□□□ 0.6
NOD1-202ENST00000411552 TMEM63BQ5T3F8 832 aa18.83■□□□□ 0.6
NOD1-202ENST00000411552 NOL8Q76FK4 1167 aaKnown RBP18.83■□□□□ 0.6
NOD1-202ENST00000411552 FCHSD1Q86WN1 690 aa18.83■□□□□ 0.6
NOD1-202ENST00000411552 GPKOWQ92917 476 aaPredicted RBP eCLIP18.83■□□□□ 0.6
NOD1-202ENST00000411552 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.6
NOD1-202ENST00000411552 UPF3AQ9H1J1 476 aaKnown RBP18.83■□□□□ 0.6
NOD1-202ENST00000411552 GNEQ9Y223 722 aaKnown RBP18.83■□□□□ 0.6
NOD1-202ENST00000411552 KIAA1217Q5T5P2 1943 aa18.82■□□□□ 0.6
NOD1-202ENST00000411552 RBM47A0AV96 593 aaKnown RBP18.82■□□□□ 0.6
NOD1-202ENST00000411552 GJA9P57773 515 aa18.82■□□□□ 0.6
NOD1-202ENST00000411552 IRX5P78411 483 aaPredicted RBP18.82■□□□□ 0.6
NOD1-202ENST00000411552 WWC2Q6AWC2 1192 aa18.82■□□□□ 0.6
NOD1-202ENST00000411552 KLHDC9Q8NEP7 349 aa18.82■□□□□ 0.6
NOD1-202ENST00000411552 NCOA5Q9HCD5 579 aaKnown RBP18.82■□□□□ 0.6
NOD1-202ENST00000411552 MEIS2O14770 477 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 NR3C2P08235 984 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 C6orf222P0C671 652 aaPredicted RBP18.81■□□□□ 0.6
NOD1-202ENST00000411552 CCT2P78371 535 aaKnown RBP18.81■□□□□ 0.6
NOD1-202ENST00000411552 STXBP2Q15833 593 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 LRRC26Q2I0M4 334 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 USP17L6PQ6QN14 398 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 TLK2Q86UE8 772 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 FERMT2Q96AC1 680 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 ZNF274Q96GC6 653 aaPredicted RBP18.81■□□□□ 0.6
NOD1-202ENST00000411552 PDCD2LQ9BRP1 358 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 WDR11Q9BZH6 1224 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 PSTPIP2Q9H939 334 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 SPC25Q9HBM1 224 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 PHF24Q9UPV7 400 aa18.81■□□□□ 0.6
NOD1-202ENST00000411552 PIK3CDO00329 1044 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 CTAGE5O15320 804 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 EVI5O60447 810 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 CST5P28325 142 aaPredicted RBP18.8■□□□□ 0.6
NOD1-202ENST00000411552 PGM5Q15124 567 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 NTRK3Q16288 839 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 DUSP28Q4G0W2 176 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 CCSAPQ6IQ19 270 aaPredicted RBP18.8■□□□□ 0.6
NOD1-202ENST00000411552 TYW1BQ6NUM6 668 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 IL31RAQ8NI17 732 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 SMARCC2Q8TAQ2 1214 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 SCFD2Q8WU76 684 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 CUL5Q93034 780 aa18.8■□□□□ 0.6
NOD1-202ENST00000411552 TSEN34Q9BSV6 310 aaKnown RBP18.8■□□□□ 0.6
NOD1-202ENST00000411552 ALDH8A1Q9H2A2 487 aaPredicted RBP18.8■□□□□ 0.6
NOD1-202ENST00000411552 STXBP3O00186 592 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 DYNC1LI2O43237 492 aaPredicted RBP18.79■□□□□ 0.6
NOD1-202ENST00000411552 EIF3JO75822 258 aaKnown RBP18.79■□□□□ 0.6
NOD1-202ENST00000411552 MYCLP12524 364 aaPredicted RBP18.79■□□□□ 0.6
NOD1-202ENST00000411552 ACLYP53396 1101 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 ATN1P54259 1190 aaPredicted RBP18.79■□□□□ 0.6
NOD1-202ENST00000411552 NAPAP54920 295 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 NKX3-2P78367 333 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 KCNA10Q16322 511 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 GNASQ5JWF2 1037 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 SEPT14Q6ZU15 432 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 PHKBQ93100 1093 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 AP5M1Q9H0R1 490 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 Q9Y3F1 56 aa18.79■□□□□ 0.6
NOD1-202ENST00000411552 FRMPD4Q14CM0 1322 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 A0A1W2PQ45 241 aaPredicted RBP18.78■□□□□ 0.6
NOD1-202ENST00000411552 A0A1W2PQY0 241 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 hCG_1984214I3L0E3 225 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 PRPF3O43395 683 aaKnown RBP18.78■□□□□ 0.6
NOD1-202ENST00000411552 PPFIA3O75145 1194 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 ARIH2O95376 493 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 BEX3Q00994 111 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 STK3Q13188 491 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 FSCN1Q16658 493 aaKnown RBP18.78■□□□□ 0.6
NOD1-202ENST00000411552 UBE2SQ16763 222 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 PFKFB3Q16875 520 aaPredicted RBP18.78■□□□□ 0.6
NOD1-202ENST00000411552 PRPF38BQ5VTL8 546 aaKnown RBP18.78■□□□□ 0.6
NOD1-202ENST00000411552 PPP1R18Q6NYC8 613 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 VSIG10LQ86VR7 867 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 ZNF713Q8N859 430 aaPredicted RBP18.78■□□□□ 0.6
NOD1-202ENST00000411552 BARHL2Q9NY43 387 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
NOD1-202ENST00000411552 H0YGN5 161 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 TXNP10599 105 aaKnown RBP18.77■□□□□ 0.6
NOD1-202ENST00000411552 SCG2P13521 617 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 IFNAR1P17181 557 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 CCND2P30279 289 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 AK2P54819 239 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 TTLL4Q14679 1199 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 PKN1Q16512 942 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms