RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 GBP1P32455 592 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 R3HDM1Q15032 1099 aaKnown RBP9.17□□□□□ -0.94
SCN9A-203ENST00000409672 TMEM259Q4ZIN3 620 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 KRBA2Q6ZNG9 492 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 CDC37L1Q7L3B6 337 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 KDELC2Q7Z4H8 507 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
SCN9A-203ENST00000409672 SLC13A4Q9UKG4 626 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 SOS1Q07889 1333 aaPredicted RBP9.17□□□□□ -0.94
SCN9A-203ENST00000409672 DDHD2O94830 711 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 IRF1P10914 325 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 U2AF2P26368 475 aaKnown RBP eCLIP9.17□□□□□ -0.941e-6■■■□□ 19.1
SCN9A-203ENST00000409672 IRX4P78413 519 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 MYL7Q01449 175 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 USP17L2Q6R6M4 530 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 MMP10P09238 476 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 SEPT12Q8IYM1 358 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 POLD4Q9HCU8 107 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 ASXL1Q8IXJ9 1541 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 WDR91A4D1P6 747 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 SASH1O94885 1247 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 SMIM5Q71RC9 77 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 NBPF11Q86T75 865 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 ZWILCHQ9H900 591 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.16□□□□□ -0.94
SCN9A-203ENST00000409672 RLBP1P12271 317 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 POLR2BP30876 1174 aaKnown RBP9.16□□□□□ -0.94
SCN9A-203ENST00000409672 TBC1D32Q96NH3 1257 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 ZHX2Q9Y6X8 837 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 THOC5Q13769 683 aaKnown RBP9.16□□□□□ -0.94
SCN9A-203ENST00000409672 IFT20Q8IY31 132 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 KRT222Q8N1A0 295 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 PSMC5P62195 406 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 FANCCQ00597 558 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 ANKRD20A3Q5VUR7 823 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 BBS5Q8N3I7 341 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 SLC7A3Q8WY07 619 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 DPF3Q92784 378 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 KDM3AQ9Y4C1 1321 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 KRIT1O00522 736 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 OPHN1O60890 802 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 YWHAHQ04917 246 aaPredicted RBP9.16□□□□□ -0.94
SCN9A-203ENST00000409672 ZNF827Q17R98 1081 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 SLFN12Q8IYM2 578 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 IFNL3Q8IZI9 196 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 BLIDQ8IZY5 108 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 WRNIP1Q96S55 665 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 IFIH1Q9BYX4 1025 aaKnown RBP9.16□□□□□ -0.94
SCN9A-203ENST00000409672 GLT8D2Q9H1C3 349 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 VAMP4O75379 141 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 TRIP13Q15645 432 aaPredicted RBP9.16□□□□□ -0.94
SCN9A-203ENST00000409672 CIAPIN1Q6FI81 312 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 MYOCDQ8IZQ8 938 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 CARD6Q9BX69 1037 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 XAB2Q9HCS7 855 aaKnown RBP9.16□□□□□ -0.94
SCN9A-203ENST00000409672 ADD3Q9UEY8 706 aaKnown RBP9.16□□□□□ -0.94
SCN9A-203ENST00000409672 FRA10AC1Q70Z53 315 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 PDZD4Q76G19 769 aaPredicted RBP9.16□□□□□ -0.94
SCN9A-203ENST00000409672 RIPOR2Q9Y4F9 1068 aa9.16□□□□□ -0.94
SCN9A-203ENST00000409672 A2MP01023 1474 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 A0A087WWV3 80 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 WDR64B1ANS9 1081 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 MXD4Q14582 209 aaPredicted RBP9.15□□□□□ -0.94
SCN9A-203ENST00000409672 CACNA2D3Q8IZS8 1091 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 NLGN1Q8N2Q7 840 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 SRPK1Q96SB4 655 aaKnown RBP9.15□□□□□ -0.94
SCN9A-203ENST00000409672 USP17L3A6NCW0 530 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 USP17L4A6NCW7 530 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 MGEA5O60502 916 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 USP17L1Q7RTZ2 530 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 DYNLL2Q96FJ2 89 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 CYP2D7A0A087X1C5 515 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 MAP3K7O43318 606 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 RECQLP46063 649 aaPredicted RBP9.15□□□□□ -0.94
SCN9A-203ENST00000409672 PASD1Q8IV76 773 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 SNX19Q92543 992 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 LRGUKQ96M69 825 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 ATP8A2Q9NTI2 1148 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 C2CD2LO14523 706 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 GTPBP6O43824 516 aaPredicted RBP9.15□□□□□ -0.94
SCN9A-203ENST00000409672 EEF1GP26641 437 aaKnown RBP9.15□□□□□ -0.94
SCN9A-203ENST00000409672 HADHAP40939 763 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 MAP7Q14244 749 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 SLC27A3Q5K4L6 730 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 ELMSAN1Q6PJG2 1045 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 PHEXP78562 749 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 CCDC93Q567U6 631 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 OR6B2Q6IFH4 312 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 HDXQ7Z353 690 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 BHMTQ93088 406 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 RAVER2Q9HCJ3 691 aaKnown RBP9.15□□□□□ -0.94
SCN9A-203ENST00000409672 LAMC3Q9Y6N6 1575 aa9.15□□□□□ -0.94
SCN9A-203ENST00000409672 PDE1BQ01064 536 aa9.15□□□□□ -0.95
SCN9A-203ENST00000409672 KRT40Q6A162 431 aa9.15□□□□□ -0.95
SCN9A-203ENST00000409672 RAB44Q7Z6P3 723 aaPredicted RBP9.15□□□□□ -0.95
SCN9A-203ENST00000409672 RPF1Q9H9Y2 349 aaKnown RBP9.15□□□□□ -0.95
SCN9A-203ENST00000409672 RIC8AQ9NPQ8 531 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms