RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 GCM1Q9NP62 436 aa6.38□□□□□ -1.39
PMS1-203ENST00000409593 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.38□□□□□ -1.39
PMS1-203ENST00000409593 PFDN2Q9UHV9 154 aa6.38□□□□□ -1.39
PMS1-203ENST00000409593 DBX1A6NMT0 343 aa6.37□□□□□ -1.39
PMS1-203ENST00000409593 PPP1R11O60927 126 aaPredicted RBP6.37□□□□□ -1.39
PMS1-203ENST00000409593 EPHB3P54753 998 aa6.37□□□□□ -1.39
PMS1-203ENST00000409593 RPL11P62913 178 aaKnown RBP6.37□□□□□ -1.39
PMS1-203ENST00000409593 KCNA10Q16322 511 aa6.37□□□□□ -1.39
PMS1-203ENST00000409593 KREMEN2Q8NCW0 462 aa6.37□□□□□ -1.39
PMS1-203ENST00000409593 CHAMP1Q96JM3 812 aa6.37□□□□□ -1.39
PMS1-203ENST00000409593 DNAJC2Q99543 621 aaKnown RBP6.37□□□□□ -1.39
PMS1-203ENST00000409593 MTA3Q9BTC8 594 aa6.37□□□□□ -1.39
PMS1-203ENST00000409593 CD320Q9NPF0 282 aa6.37□□□□□ -1.39
PMS1-203ENST00000409593 ARHGEF4Q9NR80 690 aa6.37□□□□□ -1.39
PMS1-203ENST00000409593 SMG5Q9UPR3 1016 aaKnown RBP6.37□□□□□ -1.39
PMS1-203ENST00000409593 PRODHO43272 600 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 FPR2P25090 351 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 LTBRP36941 435 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 CDR1P51861 262 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 NCKAP1LP55160 1127 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 MAP4K2Q12851 820 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 IFRD2Q12894 506 aaPredicted RBP6.36□□□□□ -1.39
PMS1-203ENST00000409593 RASGRF1Q13972 1273 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 CBX2Q14781 532 aaPredicted RBP6.36□□□□□ -1.39
PMS1-203ENST00000409593 ACBD5Q5T8D3 534 aaPredicted RBP6.36□□□□□ -1.39
PMS1-203ENST00000409593 DPF3Q92784 378 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 C1orf159Q96HA4 380 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 NUDT5Q9UKK9 219 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 TIMM13Q9Y5L4 95 aaPredicted RBP6.36□□□□□ -1.39
PMS1-203ENST00000409593 TRAV20A0A0B4J274 112 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 NTRK1P04629 796 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 LCP1P13796 627 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 LINC00310P59036 64 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 PRR5P85299 388 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 RBM10P98175 930 aaKnown RBP6.36□□□□□ -1.39
PMS1-203ENST00000409593 SSRP1Q08945 709 aaKnown RBP6.36□□□□□ -1.39
PMS1-203ENST00000409593 RBL2Q08999 1139 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 SERINC3Q13530 473 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 SLC35F1Q5T1Q4 408 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 YOD1Q5VVQ6 348 aaPredicted RBP6.36□□□□□ -1.39
PMS1-203ENST00000409593 DENND5AQ6IQ26 1287 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 USP53Q70EK8 1073 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 MZB1Q8WU39 189 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 TOX2Q96NM4 488 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 DEPDC7Q96QD5 511 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 SPATA9Q9BWV2 254 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 CCDC113Q9H0I3 377 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 CNOT6Q9ULM6 557 aaKnown RBP6.36□□□□□ -1.39
PMS1-203ENST00000409593 PCDHA2Q9Y5H9 948 aa6.36□□□□□ -1.39
PMS1-203ENST00000409593 C22orf46C9J442 243 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 ARNTLO00327 626 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 DLX3O60479 287 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 BCL6P41182 706 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 CEP68Q76N32 757 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 LDHDQ86WU2 507 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 NETO2Q8NC67 525 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 RCBTB1Q8NDN9 531 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 SRPK1Q96SB4 655 aaKnown RBP6.35□□□□□ -1.39
PMS1-203ENST00000409593 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 SNTG2Q9NY99 539 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 IRAK3Q9Y616 596 aa6.35□□□□□ -1.39
PMS1-203ENST00000409593 N4BP3O15049 544 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 CAPNS1P04632 268 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 GTF2A2P52657 109 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 RASA3Q14644 834 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 NSMFQ6X4W1 530 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 NLRP10Q86W26 655 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 LRRC56Q8IYG6 542 aaPredicted RBP6.34□□□□□ -1.39
PMS1-203ENST00000409593 PLEKHO2Q8TD55 490 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 ALG3Q92685 438 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 ZNF669Q96BR6 464 aaPredicted RBP6.34□□□□□ -1.39
PMS1-203ENST00000409593 TRMT2BQ96GJ1 504 aaKnown RBP6.34□□□□□ -1.39
PMS1-203ENST00000409593 PEX11GQ96HA9 241 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 TMEM169Q96HH4 297 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 BCAS3Q9H6U6 928 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 FBXL7Q9UJT9 491 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 PLA2G2DQ9UNK4 145 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 SIT1Q9Y3P8 196 aa6.34□□□□□ -1.39
PMS1-203ENST00000409593 NUAK1O60285 661 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 FGFR1P11362 822 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 PABPC1P11940 636 aaKnown RBP6.33□□□□□ -1.4
PMS1-203ENST00000409593 PI3P19957 117 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 JAG1P78504 1218 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 SSPNQ14714 243 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 SOGA3Q5TF21 947 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 CIAPIN1Q6FI81 312 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 DCP2Q8IU60 420 aaKnown RBP6.33□□□□□ -1.4
PMS1-203ENST00000409593 SIGLEC10Q96LC7 697 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 CDC6Q99741 560 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 FAM221BA6H8Z2 402 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 RFXAPO00287 272 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 BUB1BO60566 1050 aaPredicted RBP6.33□□□□□ -1.4
PMS1-203ENST00000409593 DIAPH1O60610 1272 aaKnown RBP6.33□□□□□ -1.4
PMS1-203ENST00000409593 CFPP27918 469 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 ZSCAN18Q8TBC5 510 aaPredicted RBP6.33□□□□□ -1.4
PMS1-203ENST00000409593 PHF20Q9BVI0 1012 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 AP5M1Q9H0R1 490 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 CLDND1Q9NY35 253 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 COA3Q9Y2R0 106 aaPredicted RBP6.33□□□□□ -1.4
PMS1-203ENST00000409593 KCTD3Q9Y597 815 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms