RNA–Protein interactions for RNA: ENST00000409181.1

SUMO1-204, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-204ENST00000409181 RIC8AQ9NPQ8 531 aa17.01■□□□□ 0.31
SUMO1-204ENST00000409181 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.01■□□□□ 0.31
SUMO1-204ENST00000409181 MCM3APO60318 1980 aa17■□□□□ 0.31
SUMO1-204ENST00000409181 CD2BP2O95400 341 aaKnown RBP17■□□□□ 0.31
SUMO1-204ENST00000409181 GJB1P08034 283 aa17■□□□□ 0.31
SUMO1-204ENST00000409181 NAPAP54920 295 aa17■□□□□ 0.31
SUMO1-204ENST00000409181 SMARCC2Q8TAQ2 1214 aa17■□□□□ 0.31
SUMO1-204ENST00000409181 RMDN3Q96TC7 470 aa17■□□□□ 0.31
SUMO1-204ENST00000409181 MPHOSPH6Q99547 160 aaKnown RBP17■□□□□ 0.31
SUMO1-204ENST00000409181 XRN2Q9H0D6 950 aaKnown RBP eCLIP17■□□□□ 0.311e-6■■□□□ 11.5
SUMO1-204ENST00000409181 PXMP2Q9NR77 195 aa17■□□□□ 0.31
SUMO1-204ENST00000409181 LRRC37A2A6NM11 1700 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 SMCO2A6NFE2 343 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 SEPT4O43236 478 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 MSCO60682 206 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 FDPSP14324 419 aaKnown RBP16.99■□□□□ 0.31
SUMO1-204ENST00000409181 CCND3P30281 292 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-204ENST00000409181 HOXA13P31271 388 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-204ENST00000409181 CLK2P49760 499 aaKnown RBP16.99■□□□□ 0.31
SUMO1-204ENST00000409181 ACVR2BQ13705 512 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 CCDC148Q8NFR7 591 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 CUL5Q93034 780 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 SHISA4Q96DD7 197 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 RNF208Q9H0X6 261 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 CNPY2Q9Y2B0 182 aa16.99■□□□□ 0.31
SUMO1-204ENST00000409181 RBM47A0AV96 593 aaKnown RBP16.98■□□□□ 0.31
SUMO1-204ENST00000409181 GJA8P48165 433 aa16.98■□□□□ 0.31
SUMO1-204ENST00000409181 PRAMEF19Q5SWL8 479 aa16.98■□□□□ 0.31
SUMO1-204ENST00000409181 LHX8Q68G74 356 aa16.98■□□□□ 0.31
SUMO1-204ENST00000409181 USP17L6PQ6QN14 398 aa16.98■□□□□ 0.31
SUMO1-204ENST00000409181 WASF1Q92558 559 aa16.98■□□□□ 0.31
SUMO1-204ENST00000409181 PDCD2LQ9BRP1 358 aa16.98■□□□□ 0.31
SUMO1-204ENST00000409181 TMEM106CQ9BVX2 250 aa16.98■□□□□ 0.31
SUMO1-204ENST00000409181 CRISPLD2Q9H0B8 497 aa16.98■□□□□ 0.31
SUMO1-204ENST00000409181 VTA1Q9NP79 307 aa16.98■□□□□ 0.31
SUMO1-204ENST00000409181 PPFIA3O75145 1194 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 SGPL1O95470 568 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 FOSP01100 380 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-204ENST00000409181 NR3C2P08235 984 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 GNA11P29992 359 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 ADCY7P51828 1080 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 PGM5Q15124 567 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 ARHGEF16Q5VV41 709 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 MCTP2Q6DN12 878 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 TAPT1Q6NXT6 567 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 VSIG10LQ86VR7 867 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 TMX3Q96JJ7 454 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 C6orf50Q9HD87 102 aa16.97■□□□□ 0.31
SUMO1-204ENST00000409181 ORC3Q9UBD5 711 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-204ENST00000409181 DDX20Q9UHI6 824 aaKnown RBP16.97■□□□□ 0.31
SUMO1-204ENST00000409181 EIF3JO75822 258 aaKnown RBP16.96■□□□□ 0.31
SUMO1-204ENST00000409181 AKR1A1P14550 325 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 PDE4DQ08499 809 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 AP3B2Q13367 1082 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 STXBP2Q15833 593 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 XRRA1Q6P2D8 792 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 FCHSD1Q86WN1 690 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 CCDC83Q8IWF9 413 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 DAGLBQ8NCG7 672 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 VPS54Q9P1Q0 977 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 OGDHLQ9ULD0 1010 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 FAM184BQ9ULE4 1060 aa16.96■□□□□ 0.31
SUMO1-204ENST00000409181 CCDC85CA6NKD9 419 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 STAM2O75886 525 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 NKX3-2P78367 333 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 HMGN5P82970 282 aaKnown RBP16.95■□□□□ 0.3
SUMO1-204ENST00000409181 NPY5RQ15761 445 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 IQSEC1Q6DN90 963 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 BICD2Q8TD16 824 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 U2AF1L4Q8WU68 220 aaKnown RBP16.95■□□□□ 0.3
SUMO1-204ENST00000409181 SNX21Q969T3 373 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 AIFM3Q96NN9 605 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 PCDHA6Q9UN73 950 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 PCDHA8Q9Y5H6 950 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 CENPFP49454 3210 aa16.95■□□□□ 0.3
SUMO1-204ENST00000409181 KIAA1217Q5T5P2 1943 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 FRMPD3Q5JV73 1810 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 POTEFA5A3E0 1075 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 SPDYE3A6NKU9 549 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 M0R2N6 131 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 JAK2O60674 1132 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 XBP1P17861 261 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 EIF2AK2P19525 551 aaKnown RBP16.94■□□□□ 0.3
SUMO1-204ENST00000409181 UBE2SQ16763 222 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 CCDC144BQ3MJ40 725 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 PCNX4Q63HM2 1172 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 DEFB118Q96PH6 123 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 ZHX1Q9UKY1 873 aaPredicted RBP16.94■□□□□ 0.3
SUMO1-204ENST00000409181 PCDHA4Q9UN74 947 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 Q9Y3F1 56 aa16.94■□□□□ 0.3
SUMO1-204ENST00000409181 DDX49Q9Y6V7 483 aaKnown RBP16.94■□□□□ 0.3
SUMO1-204ENST00000409181 KIAA0100Q14667 2235 aaKnown RBP16.94■□□□□ 0.3
SUMO1-204ENST00000409181 DUSP11O75319 330 aaKnown RBP16.93■□□□□ 0.3
SUMO1-204ENST00000409181 MYCP01106 439 aaPredicted RBP16.93■□□□□ 0.3
SUMO1-204ENST00000409181 CNGA1P29973 690 aa16.93■□□□□ 0.3
SUMO1-204ENST00000409181 CCND2P30279 289 aa16.93■□□□□ 0.3
SUMO1-204ENST00000409181 NLRP5P59047 1200 aa16.93■□□□□ 0.3
SUMO1-204ENST00000409181 MRPS9P82933 396 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms