RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 RANBP6O60518 1105 aaKnown RBP15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 RPS6P62753 249 aaKnown RBP15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 GRB10Q13322 594 aa15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 SKIV2LQ15477 1246 aaKnown RBP15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 CCDC96Q2M329 555 aa15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 TCTN1Q2MV58 587 aa15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 ARNTL2Q8WYA1 636 aa15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 FAM122AQ96E09 287 aa15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 TMEM47Q9BQJ4 181 aa15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 KIAA1217Q5T5P2 1943 aa15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 FRMPD2Q68DX3 1309 aaPredicted RBP15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 GTPBP6O43824 516 aaPredicted RBP15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 PDHBP11177 359 aa15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 ACTN1P12814 892 aa15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 CALML3P27482 149 aa15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 PTPN11Q06124 597 aaPredicted RBP15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 ALX1Q15699 326 aa15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 LRRFIP1Q32MZ4 808 aaKnown RBP15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 FAM47CQ5HY64 1035 aa15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 CCDC62Q6P9F0 684 aa15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 TMCO2Q7Z6W1 182 aaPredicted RBP15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 DHX38Q92620 1227 aaKnown RBP15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 CD320Q9NPF0 282 aa15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 COG5Q9UP83 839 aa15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 PCDHB15Q9Y5E8 787 aa15.45■□□□□ 0.06
TUBA3D-202ENST00000409047 NKRFO15226 690 aaKnown RBP eCLIP15.44■□□□□ 0.06
TUBA3D-202ENST00000409047 SNHG28P0DPA3 235 aa15.44■□□□□ 0.06
TUBA3D-202ENST00000409047 PPP2R5BQ15173 497 aa15.44■□□□□ 0.06
TUBA3D-202ENST00000409047 RNF207Q6ZRF8 634 aa15.44■□□□□ 0.06
TUBA3D-202ENST00000409047 SCFD2Q8WU76 684 aa15.44■□□□□ 0.06
TUBA3D-202ENST00000409047 KAT2BQ92831 832 aa15.44■□□□□ 0.06
TUBA3D-202ENST00000409047 GPCPD1Q9NPB8 672 aa15.44■□□□□ 0.06
TUBA3D-202ENST00000409047 TCP11L1Q9NUJ3 509 aa15.44■□□□□ 0.06
TUBA3D-202ENST00000409047 SIP14410 1827 aa15.44■□□□□ 0.06
TUBA3D-202ENST00000409047 KPNA6O60684 536 aa15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 BAIAP3O94812 1187 aa15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 TOP1P11387 765 aaKnown RBP15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 WDR5P61964 334 aaKnown RBP15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 DEFB103AP81534 67 aa15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 ZNF543Q08ER8 600 aa15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 GDF6Q6KF10 455 aaPredicted RBP15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 SESTD1Q86VW0 696 aa15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 DNERQ8NFT8 737 aa15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 GPHNQ9NQX3 736 aaPredicted RBP15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 ARIH1Q9Y4X5 557 aaPredicted RBP15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 WDR19Q8NEZ3 1342 aa15.43■□□□□ 0.06
TUBA3D-202ENST00000409047 WDFY4Q6ZS81 3184 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 FGAP02671 866 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 TXNP10599 105 aaKnown RBP15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 MX1P20591 662 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 PDE4DQ08499 809 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 RBL2Q08999 1139 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 BFSP2Q13515 415 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 TRAF7Q6Q0C0 670 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 RETREG2Q8NC44 543 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 TBC1D5Q92609 795 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 HLA-CQ95604 372 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 FTOQ9C0B1 505 aaKnown RBP eCLIP15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 COL20A1Q9P218 1284 aa15.42■□□□□ 0.06
TUBA3D-202ENST00000409047 NBNO60934 754 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 CXCL10P02778 98 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 MMP3P08254 477 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 ARHGAP1Q07960 439 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 PTGISQ16647 500 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 CAGE1Q8TC20 777 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 AFAP1L1Q8TED9 768 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 GDPD5Q8WTR4 605 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 AFG1LQ8WV93 481 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 CPVLQ9H3G5 476 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 C5orf42Q9H799 3197 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 MYH7BA7E2Y1 1941 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 RAD50Q92878 1312 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 MUC6Q6W4X9 2439 aa15.41■□□□□ 0.06
TUBA3D-202ENST00000409047 A0A0D9SFI3 127 aa15.4■□□□□ 0.06
TUBA3D-202ENST00000409047 KIF28PB7ZC32 967 aa15.4■□□□□ 0.06
TUBA3D-202ENST00000409047 MKRN4PQ13434 485 aaPredicted RBP15.4■□□□□ 0.06
TUBA3D-202ENST00000409047 BRDTQ58F21 947 aaPredicted RBP15.4■□□□□ 0.06
TUBA3D-202ENST00000409047 RGS22Q8NE09 1264 aa15.4■□□□□ 0.06
TUBA3D-202ENST00000409047 WNT8BQ93098 351 aa15.4■□□□□ 0.06
TUBA3D-202ENST00000409047 FAM227BQ96M60 508 aa15.4■□□□□ 0.06
TUBA3D-202ENST00000409047 SUGCTQ9HAC7 445 aa15.4■□□□□ 0.06
TUBA3D-202ENST00000409047 TRIOO75962 3097 aa15.4■□□□□ 0.06
TUBA3D-202ENST00000409047 MICAL3Q7RTP6 2002 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 MYH6P13533 1939 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 GPR37L1O60883 481 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 CKBP12277 381 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 SELPP16109 830 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 MBTPS1Q14703 1052 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 LY6KQ17RY6 165 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 TRIM71Q2Q1W2 868 aaKnown RBP15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 RRP12Q5JTH9 1297 aaKnown RBP15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 TMEM31Q5JXX7 168 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 LRRC8DQ7L1W4 858 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 ZNF589Q86UQ0 364 aaPredicted RBP15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 TBC1D10CQ8IV04 446 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 LMCD1Q9NZU5 365 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 GTF2IRD1Q9UHL9 959 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 ZMYM6O95789 1325 aa15.39■□□□□ 0.05
TUBA3D-202ENST00000409047 PIEZO1Q92508 2521 aa15.38■□□□□ 0.05
TUBA3D-202ENST00000409047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms