RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 CEP131Q9UPN4 1083 aa23.3■■□□□ 1.32
CHKB-201ENST00000406938 ELP1O95163 1332 aa23.3■■□□□ 1.32
CHKB-201ENST00000406938 DDX11L8A8MPP1 907 aa23.3■■□□□ 1.32
CHKB-201ENST00000406938 TLR2O60603 784 aa23.3■■□□□ 1.32
CHKB-201ENST00000406938 CRHR2Q13324 411 aa23.3■■□□□ 1.32
CHKB-201ENST00000406938 SLC39A14Q15043 492 aa23.3■■□□□ 1.32
CHKB-201ENST00000406938 WDR78Q5VTH9 848 aa23.3■■□□□ 1.32
CHKB-201ENST00000406938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.3■■□□□ 1.32
CHKB-201ENST00000406938 PURBQ96QR8 312 aaKnown RBP23.3■■□□□ 1.32
CHKB-201ENST00000406938 ZFYVE28Q9HCC9 887 aa23.3■■□□□ 1.32
CHKB-201ENST00000406938 RPTORQ8N122 1335 aa23.29■■□□□ 1.32
CHKB-201ENST00000406938 PRPF40AO75400 957 aaKnown RBP23.29■■□□□ 1.32
CHKB-201ENST00000406938 TDP2O95551 362 aa23.29■■□□□ 1.32
CHKB-201ENST00000406938 BCRP11274 1271 aa23.29■■□□□ 1.32
CHKB-201ENST00000406938 VEGFBP49765 207 aa23.29■■□□□ 1.32
CHKB-201ENST00000406938 UBXN2AP68543 259 aa23.29■■□□□ 1.32
CHKB-201ENST00000406938 REM2Q8IYK8 340 aaPredicted RBP23.29■■□□□ 1.32
CHKB-201ENST00000406938 KCNG4Q8TDN1 519 aa23.29■■□□□ 1.32
CHKB-201ENST00000406938 TAAR1Q96RJ0 339 aa23.29■■□□□ 1.32
CHKB-201ENST00000406938 MYH7BA7E2Y1 1941 aa23.29■■□□□ 1.32
CHKB-201ENST00000406938 FRMPD4Q14CM0 1322 aa23.28■■□□□ 1.32
CHKB-201ENST00000406938 SPTLC2O15270 562 aa23.28■■□□□ 1.32
CHKB-201ENST00000406938 BMP15O95972 392 aa23.28■■□□□ 1.32
CHKB-201ENST00000406938 USP11P51784 963 aa23.28■■□□□ 1.32
CHKB-201ENST00000406938 CA12O43570 354 aa23.27■■□□□ 1.32
CHKB-201ENST00000406938 ALDH1A1P00352 501 aa23.27■■□□□ 1.32
CHKB-201ENST00000406938 MARCKSP29966 332 aaPredicted RBP23.27■■□□□ 1.32
CHKB-201ENST00000406938 C17orf99Q6UX52 265 aa23.27■■□□□ 1.32
CHKB-201ENST00000406938 RMDN3Q96TC7 470 aa23.27■■□□□ 1.32
CHKB-201ENST00000406938 MMP19Q99542 508 aa23.27■■□□□ 1.32
CHKB-201ENST00000406938 LMBRD1Q9NUN5 540 aa23.27■■□□□ 1.32
CHKB-201ENST00000406938 MRVI1Q9Y6F6 885 aa23.27■■□□□ 1.32
CHKB-201ENST00000406938 GCFC2P16383 781 aaKnown RBP23.26■■□□□ 1.31
CHKB-201ENST00000406938 EIF2AK2P19525 551 aaKnown RBP23.26■■□□□ 1.31
CHKB-201ENST00000406938 ME1P48163 572 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 PTGDRQ13258 359 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 ORC2Q13416 577 aaPredicted RBP23.26■■□□□ 1.31
CHKB-201ENST00000406938 KCTD2Q14681 263 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 PPP4R3AQ6IN85 833 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 CCAR1Q8IX12 1150 aaKnown RBP23.26■■□□□ 1.31
CHKB-201ENST00000406938 NAP1L4Q99733 375 aaKnown RBP23.26■■□□□ 1.31
CHKB-201ENST00000406938 PXMP2Q9NR77 195 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 THSD7BQ9C0I4 1608 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 SLC37A4O43826 429 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 NEMFO60524 1076 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 CYP3A4P08684 503 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 FCER1AP12319 257 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 ATP2C1P98194 919 aaPredicted RBP23.26■■□□□ 1.31
CHKB-201ENST00000406938 ARHGEF16Q5VV41 709 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 MOXD1Q6UVY6 613 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 IL31RAQ8NI17 732 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 LCTP09848 1927 aa23.26■■□□□ 1.31
CHKB-201ENST00000406938 PPP6R2O75170 966 aa23.25■■□□□ 1.31
CHKB-201ENST00000406938 MAP2K2P36507 400 aa23.25■■□□□ 1.31
CHKB-201ENST00000406938 CNTN2Q02246 1040 aa23.25■■□□□ 1.31
CHKB-201ENST00000406938 PGM5Q15124 567 aa23.25■■□□□ 1.31
CHKB-201ENST00000406938 POTEDQ86YR6 584 aa23.25■■□□□ 1.31
CHKB-201ENST00000406938 JMYQ8N9B5 988 aa23.25■■□□□ 1.31
CHKB-201ENST00000406938 DDX25Q9UHL0 483 aaKnown RBP23.25■■□□□ 1.31
CHKB-201ENST00000406938 MORC2Q9Y6X9 1032 aaPredicted RBP23.25■■□□□ 1.31
CHKB-201ENST00000406938 CYP3A7-CYP3A51PA0A087WV96 503 aa23.24■■□□□ 1.31
CHKB-201ENST00000406938 POTEB2H3BUK9 544 aa23.24■■□□□ 1.31
CHKB-201ENST00000406938 GADD45BO75293 160 aaPredicted RBP23.24■■□□□ 1.31
CHKB-201ENST00000406938 CYP3A7P24462 503 aa23.24■■□□□ 1.31
CHKB-201ENST00000406938 CIITAP33076 1130 aa23.24■■□□□ 1.31
CHKB-201ENST00000406938 C4orf32Q8N8J7 132 aa23.24■■□□□ 1.31
CHKB-201ENST00000406938 NSUN6Q8TEA1 469 aaKnown RBP23.24■■□□□ 1.31
CHKB-201ENST00000406938 PDCD2LQ9BRP1 358 aa23.24■■□□□ 1.31
CHKB-201ENST00000406938 TMEM60Q9H2L4 133 aa23.24■■□□□ 1.31
CHKB-201ENST00000406938 PCDHA7Q9UN72 937 aa23.24■■□□□ 1.31
CHKB-201ENST00000406938 FAM86B1E9PN63 330 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 PGK2P07205 417 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 FAM86B2P0C5J1 330 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 MAPK4P31152 587 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 TPRNQ4KMQ1 711 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 PCNX4Q63HM2 1172 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 GPR142Q7Z601 462 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 MBOAT7Q96N66 472 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 IVNS1ABPQ9Y6Y0 642 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 ASTN1O14525 1302 aa23.23■■□□□ 1.31
CHKB-201ENST00000406938 ZNF76P36508 570 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 FAM133AQ8N9E0 248 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 DNERQ8NFT8 737 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 FBXO2Q9UK22 296 aaPredicted RBP23.22■■□□□ 1.31
CHKB-201ENST00000406938 PLXNB2O15031 1838 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 DNAJC25-GNG10A0A024R161 153 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 LAD1O00515 517 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 OR52Z1P0C646 297 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 PRR16Q569H4 304 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 ABRAQ8N0Z2 381 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 KRI1Q8N9T8 703 aaKnown RBP23.22■■□□□ 1.31
CHKB-201ENST00000406938 LENG9Q96B70 501 aa23.22■■□□□ 1.31
CHKB-201ENST00000406938 ZFP91Q96JP5 570 aaPredicted RBP23.22■■□□□ 1.31
CHKB-201ENST00000406938 IGLV3-22A0A075B6J6 115 aa23.21■■□□□ 1.31
CHKB-201ENST00000406938 PTPREP23469 700 aa23.21■■□□□ 1.31
CHKB-201ENST00000406938 UBE2HP62256 183 aa23.21■■□□□ 1.31
CHKB-201ENST00000406938 CALCRLQ16602 461 aa23.21■■□□□ 1.31
CHKB-201ENST00000406938 Q4G0T1 1027 aa23.21■■□□□ 1.31
CHKB-201ENST00000406938 PLEKHH3Q7Z736 793 aa23.21■■□□□ 1.31
CHKB-201ENST00000406938 CYP2W1Q8TAV3 490 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms