RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 ORC4O43929 436 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 CA3P07451 260 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 MYL3P08590 195 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 BMP1P13497 986 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 SLC16A2P36021 539 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 TFF2Q03403 129 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 MCMDC2Q4G0Z9 681 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 SYDE2Q5VT97 1194 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 OR6J1Q8NGC5 347 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 MTG1Q9BT17 334 aaPredicted RBP21.04■□□□□ 0.96
HDAC11-204ENST00000404040 MYH7BA7E2Y1 1941 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 SIP14410 1827 aa21.04■□□□□ 0.96
HDAC11-204ENST00000404040 PTPDC1A2A3K4 754 aa21.03■□□□□ 0.96
HDAC11-204ENST00000404040 POU3F3P20264 500 aaPredicted RBP21.03■□□□□ 0.96
HDAC11-204ENST00000404040 RFC2P35250 354 aa21.03■□□□□ 0.96
HDAC11-204ENST00000404040 AAK1Q2M2I8 961 aa21.03■□□□□ 0.96
HDAC11-204ENST00000404040 CASC1Q6TDU7 716 aa21.03■□□□□ 0.96
HDAC11-204ENST00000404040 SLC9A7Q96T83 725 aa21.03■□□□□ 0.96
HDAC11-204ENST00000404040 RAD50Q92878 1312 aa21.03■□□□□ 0.96
HDAC11-204ENST00000404040 PITPNM1O00562 1244 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 ACTN1P12814 892 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 PPP2R5BQ15173 497 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 NBPF20Q3BBV1 942 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 FAM47CQ5HY64 1035 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 VPS53Q5VIR6 699 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 NFRKBQ6P4R8 1299 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 SKAP1Q86WV1 359 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 CLEC4DQ8WXI8 215 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 GPHNQ9NQX3 736 aaPredicted RBP21.02■□□□□ 0.96
HDAC11-204ENST00000404040 MTCH2Q9Y6C9 303 aa21.02■□□□□ 0.96
HDAC11-204ENST00000404040 FRMPD2Q68DX3 1309 aaPredicted RBP21.02■□□□□ 0.95
HDAC11-204ENST00000404040 EPOPA6NHQ4 379 aa21.01■□□□□ 0.95
HDAC11-204ENST00000404040 RFXAPO00287 272 aa21.01■□□□□ 0.95
HDAC11-204ENST00000404040 NKRFO15226 690 aaKnown RBP eCLIP21.01■□□□□ 0.953e-7■■■■□ 24.1
HDAC11-204ENST00000404040 GTPBP6O43824 516 aaPredicted RBP21.01■□□□□ 0.95
HDAC11-204ENST00000404040 FGRP09769 529 aa21.01■□□□□ 0.95
HDAC11-204ENST00000404040 TOP1P11387 765 aaKnown RBP21.01■□□□□ 0.95
HDAC11-204ENST00000404040 EDNRBP24530 442 aa21.01■□□□□ 0.95
HDAC11-204ENST00000404040 CALML3P27482 149 aa21.01■□□□□ 0.95
HDAC11-204ENST00000404040 KCNQ1P51787 676 aa21.01■□□□□ 0.95
HDAC11-204ENST00000404040 NMIQ13287 307 aaPredicted RBP21.01■□□□□ 0.95
HDAC11-204ENST00000404040 BRDTQ58F21 947 aaPredicted RBP21.01■□□□□ 0.95
HDAC11-204ENST00000404040 PDE4DQ08499 809 aa21■□□□□ 0.95
HDAC11-204ENST00000404040 SKIV2LQ15477 1246 aaKnown RBP21■□□□□ 0.95
HDAC11-204ENST00000404040 CWC27Q6UX04 472 aaKnown RBP21■□□□□ 0.95
HDAC11-204ENST00000404040 RNF207Q6ZRF8 634 aa21■□□□□ 0.95
HDAC11-204ENST00000404040 PHOSPHO2Q8TCD6 241 aa21■□□□□ 0.95
HDAC11-204ENST00000404040 SCFD2Q8WU76 684 aa21■□□□□ 0.95
HDAC11-204ENST00000404040 TMEM47Q9BQJ4 181 aa21■□□□□ 0.95
HDAC11-204ENST00000404040 CERS4Q9HA82 394 aa21■□□□□ 0.95
HDAC11-204ENST00000404040 A6NJR5 290 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 KPNA6O60684 536 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 ARHGEF15O94989 841 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 IQCF3P0C7M6 154 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 CHMLP26374 656 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 PLA2G5P39877 138 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 HERC6Q8IVU3 1022 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 PPP1R13LQ8WUF5 828 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 FAM227BQ96M60 508 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 GPCPD1Q9NPB8 672 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 PNMA2Q9UL42 364 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 WDR19Q8NEZ3 1342 aa20.99■□□□□ 0.95
HDAC11-204ENST00000404040 A0A0D9SFI3 127 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 PDHBP11177 359 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 RPS6P62753 249 aaKnown RBP20.98■□□□□ 0.95
HDAC11-204ENST00000404040 TAP1Q03518 808 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 PTPN11Q06124 597 aaPredicted RBP20.98■□□□□ 0.95
HDAC11-204ENST00000404040 ALX1Q15699 326 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 RETREG2Q8NC44 543 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 DNERQ8NFT8 737 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 COPS5Q92905 334 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 MPHOSPH6Q99547 160 aaKnown RBP20.98■□□□□ 0.95
HDAC11-204ENST00000404040 C1QTNF1Q9BXJ1 281 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 TOMM22Q9NS69 142 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 TCP11L1Q9NUJ3 509 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 CCDC171Q6TFL3 1326 aa20.98■□□□□ 0.95
HDAC11-204ENST00000404040 MICAL3Q7RTP6 2002 aa20.97■□□□□ 0.95
HDAC11-204ENST00000404040 CDC45O75419 566 aa20.97■□□□□ 0.95
HDAC11-204ENST00000404040 BFSP2Q13515 415 aa20.97■□□□□ 0.95
HDAC11-204ENST00000404040 RRP12Q5JTH9 1297 aaKnown RBP20.97■□□□□ 0.95
HDAC11-204ENST00000404040 KRT40Q6A162 431 aa20.97■□□□□ 0.95
HDAC11-204ENST00000404040 ARNTL2Q8WYA1 636 aa20.97■□□□□ 0.95
HDAC11-204ENST00000404040 FTOQ9C0B1 505 aaKnown RBP eCLIP20.97■□□□□ 0.95
HDAC11-204ENST00000404040 COG5Q9UP83 839 aa20.97■□□□□ 0.95
HDAC11-204ENST00000404040 BAIAP3O94812 1187 aa20.96■□□□□ 0.95
HDAC11-204ENST00000404040 ZNF543Q08ER8 600 aa20.96■□□□□ 0.95
HDAC11-204ENST00000404040 NOD1Q9Y239 953 aa20.96■□□□□ 0.95
HDAC11-204ENST00000404040 ZMYM6O95789 1325 aa20.96■□□□□ 0.95
HDAC11-204ENST00000404040 ARIH2O95376 493 aa20.95■□□□□ 0.94
HDAC11-204ENST00000404040 TXNP10599 105 aaKnown RBP20.95■□□□□ 0.94
HDAC11-204ENST00000404040 KIF28PB7ZC32 967 aa20.94■□□□□ 0.94
HDAC11-204ENST00000404040 FGAP02671 866 aa20.94■□□□□ 0.94
HDAC11-204ENST00000404040 SNHG28P0DPA3 235 aa20.94■□□□□ 0.94
HDAC11-204ENST00000404040 FAM122AQ96E09 287 aa20.94■□□□□ 0.94
HDAC11-204ENST00000404040 CTAGE1Q96RT6 745 aa20.94■□□□□ 0.94
HDAC11-204ENST00000404040 MUC6Q6W4X9 2439 aa20.93■□□□□ 0.94
HDAC11-204ENST00000404040 B4DLN1 442 aa20.93■□□□□ 0.94
HDAC11-204ENST00000404040 MRPL12P52815 198 aaKnown RBP20.93■□□□□ 0.94
HDAC11-204ENST00000404040 GRB10Q13322 594 aa20.93■□□□□ 0.94
HDAC11-204ENST00000404040 PTGISQ16647 500 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms