RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 PARP9Q8IXQ6 854 aa15.34■□□□□ 0.05
HMGA2-204ENST00000403681 SLC24A3Q9HC58 644 aa15.34■□□□□ 0.05
HMGA2-204ENST00000403681 ANKIB1Q9P2G1 1089 aa15.34■□□□□ 0.05
HMGA2-204ENST00000403681 CCDC169A6NNP5 214 aa15.33■□□□□ 0.05
HMGA2-204ENST00000403681 PALMO75781 387 aa15.33■□□□□ 0.05
HMGA2-204ENST00000403681 PLCG1P19174 1290 aa15.33■□□□□ 0.05
HMGA2-204ENST00000403681 ELF1P32519 619 aa15.33■□□□□ 0.05
HMGA2-204ENST00000403681 ATP2C1P98194 919 aaPredicted RBP15.33■□□□□ 0.05
HMGA2-204ENST00000403681 FBXL16Q8N461 479 aa15.33■□□□□ 0.05
HMGA2-204ENST00000403681 MSL3Q8N5Y2 521 aaKnown RBP15.33■□□□□ 0.05
HMGA2-204ENST00000403681 ARL8AQ96BM9 186 aa15.33■□□□□ 0.05
HMGA2-204ENST00000403681 TRIM6Q9C030 488 aaPredicted RBP15.33■□□□□ 0.05
HMGA2-204ENST00000403681 DMGDHQ9UI17 866 aaKnown RBP15.33■□□□□ 0.05
HMGA2-204ENST00000403681 AARSP49588 968 aaKnown RBP eCLIP15.33■□□□□ 0.04
HMGA2-204ENST00000403681 SARSP49591 514 aaKnown RBP15.33■□□□□ 0.04
HMGA2-204ENST00000403681 PNMA1Q8ND90 353 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 COL15A1P39059 1388 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 FAM170AA1A519 330 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 PGRMC1O00264 195 aaKnown RBP15.33■□□□□ 0.04
HMGA2-204ENST00000403681 RASGRF1Q13972 1273 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 PAPD7Q5XG87 772 aaKnown RBP15.33■□□□□ 0.04
HMGA2-204ENST00000403681 MMGT1Q8N4V1 131 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 ERMNQ8TAM6 284 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 ADAMTS1Q9UHI8 967 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 CLTCQ00610 1675 aaKnown RBP15.33■□□□□ 0.04
HMGA2-204ENST00000403681 CYP2D7A0A087X1C5 515 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 SMCO2A6NFE2 343 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 LRRC53A6NM62 1247 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 H2AFZP0C0S5 128 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 FAM133BQ5BKY9 247 aaKnown RBP15.33■□□□□ 0.04
HMGA2-204ENST00000403681 H2AFVQ71UI9 128 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 AP1M1Q9BXS5 423 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 PCDHA4Q9UN74 947 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 AXIN2Q9Y2T1 843 aa15.33■□□□□ 0.04
HMGA2-204ENST00000403681 RPL13P26373 211 aaKnown RBP15.32■□□□□ 0.04
HMGA2-204ENST00000403681 GFPT1Q06210 699 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-204ENST00000403681 LRRC41Q15345 812 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 U2AF1L4Q8WU68 220 aaKnown RBP15.32■□□□□ 0.04
HMGA2-204ENST00000403681 RUBCNQ92622 972 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 FAM212AQ96EL1 285 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 LACRTQ9GZZ8 138 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 EHD4Q9H223 541 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 HOMER3Q9NSC5 361 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.32■□□□□ 0.042e-7■■■■□ 24.5
HMGA2-204ENST00000403681 DUSP10Q9Y6W6 482 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 ERVV-2B6SEH9 535 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 TBC1D1Q86TI0 1168 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-204ENST00000403681 SYCP3Q8IZU3 236 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 ADSSL1Q8N142 457 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 ANKRD42Q8N9B4 389 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 CD248Q9HCU0 757 aa15.32■□□□□ 0.04
HMGA2-204ENST00000403681 RNPC3Q96LT9 517 aaKnown RBP15.32■□□□□ 0.04
HMGA2-204ENST00000403681 HIP1RO75146 1068 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 SYF2O95926 243 aaKnown RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 SRGNP10124 158 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 TNFAIP3P21580 790 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 ATP5DP30049 168 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 CUL1Q13616 776 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 SEL1L2Q5TEA6 688 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 MS4A14Q96JA4 679 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 SPATS2LQ9NUQ6 558 aaKnown RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 GNA14O95837 355 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 GBP1P32455 592 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 CARSP49589 748 aaKnown RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 BIRC3Q13489 604 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 NBPF9Q3BBW0 867 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 NT5DC1Q5TFE4 455 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 TRIM68Q6AZZ1 485 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 NEK8Q86SG6 692 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 TEX2Q8IWB9 1127 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 HVCN1Q96D96 273 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 CNOT10Q9H9A5 744 aaKnown RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 RBM12Q9NTZ6 932 aaKnown RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 PP2D1A8MPX8 630 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 GSG1L2A8MUP6 293 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 BACH1O14867 736 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 TMTC3Q6ZXV5 915 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 RNF10Q8N5U6 811 aaKnown RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 AK8Q96MA6 479 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 FAM114A2Q9NRY5 505 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 PPP1R1BQ9UD71 204 aaPredicted RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 HEG1Q9ULI3 1381 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 SERPING1P05155 500 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 EPB41P11171 864 aaKnown RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 ALDH3A1P30838 453 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 RCAN1P53805 252 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 EZH2Q15910 746 aaKnown RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 UIMC1Q96RL1 719 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 BIN2Q9UBW5 565 aaPredicted RBP15.31■□□□□ 0.04
HMGA2-204ENST00000403681 CD2APQ9Y5K6 639 aa15.31■□□□□ 0.04
HMGA2-204ENST00000403681 SNAP23O00161 211 aa15.3■□□□□ 0.04
HMGA2-204ENST00000403681 LAD1O00515 517 aa15.3■□□□□ 0.04
HMGA2-204ENST00000403681 ABCB4P21439 1286 aa15.3■□□□□ 0.04
HMGA2-204ENST00000403681 MAGOHP61326 146 aaKnown RBP15.3■□□□□ 0.04
HMGA2-204ENST00000403681 FAM133AQ8N9E0 248 aa15.3■□□□□ 0.04
HMGA2-204ENST00000403681 MAGOHBQ96A72 148 aaKnown RBP15.3■□□□□ 0.04
HMGA2-204ENST00000403681 FAM237AA0A1B0GTK4 181 aa15.3■□□□□ 0.04
HMGA2-204ENST00000403681 CYP27B1O15528 508 aa15.3■□□□□ 0.04
HMGA2-204ENST00000403681 ECM2O94769 699 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms