RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 PXMP2Q9NR77 195 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 GNEQ9Y223 722 aaKnown RBP22.15■■□□□ 1.14
RTN4-207ENST00000402434 SYNRGQ9UMZ2 1314 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.15■■□□□ 1.14
RTN4-207ENST00000402434 PIK3CDO00329 1044 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 NTRK3Q16288 839 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 ARHGEF16Q5VV41 709 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 RNF180Q86T96 592 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 UPF3AQ9H1J1 476 aaKnown RBP22.15■■□□□ 1.14
RTN4-207ENST00000402434 KBTBD13C9JR72 458 aa22.14■■□□□ 1.13
RTN4-207ENST00000402434 MEIS2O14770 477 aa22.14■■□□□ 1.13
RTN4-207ENST00000402434 SMPD1P17405 629 aa22.14■■□□□ 1.13
RTN4-207ENST00000402434 GJA9P57773 515 aa22.14■■□□□ 1.13
RTN4-207ENST00000402434 KLHDC9Q8NEP7 349 aa22.14■■□□□ 1.13
RTN4-207ENST00000402434 NR3C2P08235 984 aa22.13■■□□□ 1.13
RTN4-207ENST00000402434 CST5P28325 142 aaPredicted RBP22.13■■□□□ 1.13
RTN4-207ENST00000402434 STXBP2Q15833 593 aa22.13■■□□□ 1.13
RTN4-207ENST00000402434 DUSP28Q4G0W2 176 aa22.13■■□□□ 1.13
RTN4-207ENST00000402434 WWC2Q6AWC2 1192 aa22.13■■□□□ 1.13
RTN4-207ENST00000402434 CCSAPQ6IQ19 270 aaPredicted RBP22.13■■□□□ 1.13
RTN4-207ENST00000402434 HEATR3Q7Z4Q2 680 aa22.13■■□□□ 1.13
RTN4-207ENST00000402434 PDCD2LQ9BRP1 358 aa22.13■■□□□ 1.13
RTN4-207ENST00000402434 TSEN34Q9BSV6 310 aaKnown RBP22.13■■□□□ 1.13
RTN4-207ENST00000402434 PSTPIP2Q9H939 334 aa22.13■■□□□ 1.13
RTN4-207ENST00000402434 Q9Y3F1 56 aa22.13■■□□□ 1.13
RTN4-207ENST00000402434 hCG_1984214I3L0E3 225 aa22.12■■□□□ 1.13
RTN4-207ENST00000402434 IFNAR1P17181 557 aa22.12■■□□□ 1.13
RTN4-207ENST00000402434 EIF2AK2P19525 551 aaKnown RBP22.12■■□□□ 1.13
RTN4-207ENST00000402434 CCT2P78371 535 aaKnown RBP22.12■■□□□ 1.13
RTN4-207ENST00000402434 USP17L6PQ6QN14 398 aa22.12■■□□□ 1.13
RTN4-207ENST00000402434 FCHSD1Q86WN1 690 aa22.12■■□□□ 1.13
RTN4-207ENST00000402434 TEX2Q8IWB9 1127 aa22.12■■□□□ 1.13
RTN4-207ENST00000402434 ZNF713Q8N859 430 aaPredicted RBP22.12■■□□□ 1.13
RTN4-207ENST00000402434 GPKOWQ92917 476 aaPredicted RBP eCLIP22.12■■□□□ 1.13
RTN4-207ENST00000402434 LARP6Q9BRS8 491 aaKnown RBP22.12■■□□□ 1.13
RTN4-207ENST00000402434 WDR11Q9BZH6 1224 aa22.12■■□□□ 1.13
RTN4-207ENST00000402434 SENP6Q9GZR1 1112 aaPredicted RBP22.12■■□□□ 1.13
RTN4-207ENST00000402434 SPC25Q9HBM1 224 aa22.12■■□□□ 1.13
RTN4-207ENST00000402434 NCOA5Q9HCD5 579 aaKnown RBP22.12■■□□□ 1.13
RTN4-207ENST00000402434 RBM27Q9P2N5 1060 aaKnown RBP22.12■■□□□ 1.13
RTN4-207ENST00000402434 PHF24Q9UPV7 400 aa22.12■■□□□ 1.13
RTN4-207ENST00000402434 GTF3C3Q9Y5Q9 886 aa22.12■■□□□ 1.13
RTN4-207ENST00000402434 CTAGE5O15320 804 aa22.11■■□□□ 1.13
RTN4-207ENST00000402434 PRPF3O43395 683 aaKnown RBP22.11■■□□□ 1.13
RTN4-207ENST00000402434 EIF3JO75822 258 aaKnown RBP22.11■■□□□ 1.13
RTN4-207ENST00000402434 MYCNP04198 464 aaPredicted RBP22.11■■□□□ 1.13
RTN4-207ENST00000402434 TMEM63BQ5T3F8 832 aa22.11■■□□□ 1.13
RTN4-207ENST00000402434 TYW1BQ6NUM6 668 aa22.11■■□□□ 1.13
RTN4-207ENST00000402434 VSIG10LQ86VR7 867 aa22.11■■□□□ 1.13
RTN4-207ENST00000402434 SCFD2Q8WU76 684 aa22.11■■□□□ 1.13
RTN4-207ENST00000402434 DPF3Q92784 378 aa22.11■■□□□ 1.13
RTN4-207ENST00000402434 CUL5Q93034 780 aa22.11■■□□□ 1.13
RTN4-207ENST00000402434 BARHL2Q9NY43 387 aa22.11■■□□□ 1.13
RTN4-207ENST00000402434 FRMPD4Q14CM0 1322 aa22.11■■□□□ 1.13
RTN4-207ENST00000402434 CEP290O15078 2479 aa22.1■■□□□ 1.13
RTN4-207ENST00000402434 C6orf222P0C671 652 aaPredicted RBP22.1■■□□□ 1.13
RTN4-207ENST00000402434 PGM5Q15124 567 aa22.1■■□□□ 1.13
RTN4-207ENST00000402434 ANKRD1Q15327 319 aa22.1■■□□□ 1.13
RTN4-207ENST00000402434 PFKFB3Q16875 520 aaPredicted RBP22.1■■□□□ 1.13
RTN4-207ENST00000402434 PPP1R18Q6NYC8 613 aa22.1■■□□□ 1.13
RTN4-207ENST00000402434 NOL8Q76FK4 1167 aaKnown RBP22.1■■□□□ 1.13
RTN4-207ENST00000402434 SMARCC2Q8TAQ2 1214 aa22.1■■□□□ 1.13
RTN4-207ENST00000402434 RNF26Q9BY78 433 aaPredicted RBP22.1■■□□□ 1.13
RTN4-207ENST00000402434 MYADML2A6NDP7 307 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 STXBP3O00186 592 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 AK2P54819 239 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 IRX5P78411 483 aaPredicted RBP22.09■■□□□ 1.13
RTN4-207ENST00000402434 PKN1Q16512 942 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 CCDC62Q6P9F0 684 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 TLK2Q86UE8 772 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 TPCN1Q9ULQ1 816 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 NKRFO15226 690 aaKnown RBP eCLIP22.09■■□□□ 1.13
RTN4-207ENST00000402434 SCG2P13521 617 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 NEK4P51957 841 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 NAPAP54920 295 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 KCNA10Q16322 511 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 GNASQ5JWF2 1037 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 IL31RAQ8NI17 732 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 PHKBQ93100 1093 aa22.09■■□□□ 1.13
RTN4-207ENST00000402434 MOXD2PA6NHM9 499 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 DYNC1LI2O43237 492 aaPredicted RBP22.08■■□□□ 1.12
RTN4-207ENST00000402434 EVI5O60447 810 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 PTGS1P23219 599 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 RBM25P49756 843 aaKnown RBP22.08■■□□□ 1.12
RTN4-207ENST00000402434 ACLYP53396 1101 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 TTLL4Q14679 1199 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 LRRC26Q2I0M4 334 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 SEPT14Q6ZU15 432 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 PCSK9Q8NBP7 692 aaKnown RBP22.08■■□□□ 1.12
RTN4-207ENST00000402434 KIF2CQ99661 725 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 AP5M1Q9H0R1 490 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 RIC8AQ9NPQ8 531 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 ALPK3Q96L96 1907 aa22.08■■□□□ 1.12
RTN4-207ENST00000402434 KIAA1217Q5T5P2 1943 aa22.07■■□□□ 1.12
RTN4-207ENST00000402434 RGS20O76081 388 aa22.07■■□□□ 1.12
RTN4-207ENST00000402434 TXNP10599 105 aaKnown RBP22.07■■□□□ 1.12
RTN4-207ENST00000402434 MYCLP12524 364 aaPredicted RBP22.07■■□□□ 1.12
RTN4-207ENST00000402434 CCND2P30279 289 aa22.07■■□□□ 1.12
RTN4-207ENST00000402434 AKAP17AQ02040 695 aaKnown RBP22.07■■□□□ 1.12
RTN4-207ENST00000402434 C1orf53Q5VUE5 145 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms