RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 NDUFV2P19404 249 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 CHMLP26374 656 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 CCDC96Q2M329 555 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 PRAMEF19Q5SWL8 479 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 IQCA1Q86XH1 822 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 DGKHQ86XP1 1220 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 ANKRD35Q8N283 1001 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 TINF2Q9BSI4 451 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 C11orf49Q9H6J7 331 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 PRR12Q9ULL5 1215 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 SEPT4O43236 478 aa13.82□□□□□ -0.2
SMIM11A-201ENST00000399292 AGBL1Q96MI9 1066 aa13.82□□□□□ -0.2
SMIM11A-201ENST00000399292 ZKSCAN3Q9BRR0 538 aa13.82□□□□□ -0.2
SMIM11A-201ENST00000399292 KRT23Q9C075 422 aa13.82□□□□□ -0.2
SMIM11A-201ENST00000399292 IL25Q9H293 177 aa13.82□□□□□ -0.2
SMIM11A-201ENST00000399292 CNNM2Q9H8M5 875 aa13.82□□□□□ -0.2
SMIM11A-201ENST00000399292 NRBP1Q9UHY1 535 aa13.82□□□□□ -0.2
SMIM11A-201ENST00000399292 NEDD4P46934 1319 aa13.82□□□□□ -0.2
SMIM11A-201ENST00000399292 RAD50Q92878 1312 aa13.82□□□□□ -0.2
SMIM11A-201ENST00000399292 DNAJC25-GNG10A0A024R161 153 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 B4E1Z4 1266 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 CCNYL3P0C7X3 344 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 SLC16A2P36021 539 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 SNAP25P60880 206 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 TKFCQ3LXA3 575 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 TTBK2Q6IQ55 1244 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 BTNL9Q6UXG8 535 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 TREML4Q6UXN2 200 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 MSL3Q8N5Y2 521 aaKnown RBP13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 ARRDC4Q8NCT1 418 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 HOMER2Q9NSB8 354 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 ZSWIM5Q9P217 1185 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 ZNF536O15090 1300 aa13.81□□□□□ -0.2
SMIM11A-201ENST00000399292 CEP290O15078 2479 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 PDHBP11177 359 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 PTPRNQ16849 979 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 SYDE2Q5VT97 1194 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 ANO1Q5XXA6 986 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 CENPQQ7L2Z9 268 aaPredicted RBP13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 ANKS1AQ92625 1134 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 HPS1Q92902 700 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 TRERF1Q96PN7 1200 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 ZSCAN10Q96SZ4 725 aaPredicted RBP13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 ACAD9Q9H845 621 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 KAT14Q9H8E8 782 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 ATP13A2Q9NQ11 1180 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 RNF146Q9NTX7 359 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 CNPY2Q9Y2B0 182 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 FRMPD2Q68DX3 1309 aaPredicted RBP13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 RANBP2P49792 3224 aaKnown RBP13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 MYH4Q9Y623 1939 aa13.8□□□□□ -0.2
SMIM11A-201ENST00000399292 ZNF236Q9UL36 1845 aa13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 SGSM2O43147 1006 aa13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 COL6A1P12109 1028 aa13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 ALAS1P13196 640 aa13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 PTH1RQ03431 593 aa13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 TRDNQ13061 729 aa13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 MAMDC4Q6UXC1 1216 aa13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 SENP6Q9GZR1 1112 aaPredicted RBP13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 CCPG1Q9ULG6 757 aa13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 SYNGAP1Q96PV0 1343 aa13.79□□□□□ -0.2
SMIM11A-201ENST00000399292 PARP14Q460N5 1801 aa13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 DNM1LO00429 736 aa13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 ICAM1P05362 532 aa13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 SNHG28P0DPA3 235 aa13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 TAL1P17542 331 aaPredicted RBP13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 ZNF543Q08ER8 600 aa13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 GPATCH4Q5T3I0 446 aaKnown RBP13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 GJC2Q5T442 439 aaPredicted RBP13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 LCE2AQ5TA79 106 aaPredicted RBP13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 UBAC1Q9BSL1 405 aa13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 PNMA2Q9UL42 364 aa13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 PFASO15067 1338 aa13.78□□□□□ -0.2
SMIM11A-201ENST00000399292 TNKSO95271 1327 aa13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 SNAI1O95863 264 aaPredicted RBP13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 CYP21A2P08686 494 aa13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 ZNF865P0CJ78 1059 aaPredicted RBP13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 RARBP10826 455 aa13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 COL11A1P12107 1806 aaPredicted RBP13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 AKR1A1P14550 325 aa13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 HABP4Q5JVS0 413 aaKnown RBP13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 KIAA1211Q6ZU35 1233 aa13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 C7orf61Q8IZ16 206 aa13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 ENAHQ8N8S7 591 aaPredicted RBP13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 PRR7Q8TB68 274 aa13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 MAP4K1Q92918 833 aa13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 A1CFQ9NQ94 594 aaKnown RBP13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 FAM184BQ9ULE4 1060 aa13.77□□□□□ -0.21
SMIM11A-201ENST00000399292 KBTBD13C9JR72 458 aa13.76□□□□□ -0.21
SMIM11A-201ENST00000399292 SIAH2O43255 324 aa13.76□□□□□ -0.21
SMIM11A-201ENST00000399292 GOLGA8HP0CJ92 632 aa13.76□□□□□ -0.21
SMIM11A-201ENST00000399292 CNTN2Q02246 1040 aa13.76□□□□□ -0.21
SMIM11A-201ENST00000399292 ACVR2BQ13705 512 aa13.76□□□□□ -0.21
SMIM11A-201ENST00000399292 MUM1L1Q5H9M0 696 aa13.76□□□□□ -0.21
SMIM11A-201ENST00000399292 IFIT1BQ5T764 474 aaKnown RBP13.76□□□□□ -0.21
SMIM11A-201ENST00000399292 RNF180Q86T96 592 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms