RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 SHISA4Q96DD7 197 aa12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 TAAR1Q96RJ0 339 aa12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 IWS1Q96ST2 819 aa12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 GLT8D2Q9H1C3 349 aa12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 UNC93B1Q9H1C4 597 aa12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 ABHD16BQ9H3Z7 469 aa12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 RIC8AQ9NPQ8 531 aa12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 PXMP2Q9NR77 195 aa12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
CYCSP55-201ENST00000399027 SMCO2A6NFE2 343 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 B4DLN1 442 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 PPFIA3O75145 1194 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 ZNF865P0CJ78 1059 aaPredicted RBP12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 FDPSP14324 419 aaKnown RBP12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 CAPN2P17655 700 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 MRPL12P52815 198 aaKnown RBP12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 USP17L6PQ6QN14 398 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 CCDC148Q8NFR7 591 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 SMARCC2Q8TAQ2 1214 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 CUL5Q93034 780 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 RMDN3Q96TC7 470 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 LLPHQ9BRT6 129 aaKnown RBP12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 RNF208Q9H0X6 261 aa12.01□□□□□ -0.49
CYCSP55-201ENST00000399027 DOCK5Q9H7D0 1870 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 BRCA2P51587 3418 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 SEPT4O43236 478 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 MSCO60682 206 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 GJB1P08034 283 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 ADCY7P51828 1080 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 ACVR2BQ13705 512 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 PGM5Q15124 567 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 PRAMEF19Q5SWL8 479 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 ARHGEF16Q5VV41 709 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 CCDC83Q8IWF9 413 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 TMX3Q96JJ7 454 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 PDCD2LQ9BRP1 358 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 VTA1Q9NP79 307 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 ORC3Q9UBD5 711 aaPredicted RBP12□□□□□ -0.49
CYCSP55-201ENST00000399027 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
CYCSP55-201ENST00000399027 RBM47A0AV96 593 aaKnown RBP11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 SGPL1O95470 568 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 AKR1A1P14550 325 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 GNA11P29992 359 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 GJA8P48165 433 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 AP3B2Q13367 1082 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 UBE2SQ16763 222 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 LHX8Q68G74 356 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 MCTP2Q6DN12 878 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 TAPT1Q6NXT6 567 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 FCHSD1Q86WN1 690 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 DAGLBQ8NCG7 672 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 WASF1Q92558 559 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 AIFM3Q96NN9 605 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 C6orf50Q9HD87 102 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 VPS54Q9P1Q0 977 aa11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 DDX20Q9UHI6 824 aaKnown RBP11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 DDX49Q9Y6V7 483 aaKnown RBP11.99□□□□□ -0.49
CYCSP55-201ENST00000399027 CCDC85CA6NKD9 419 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 M0R2N6 131 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 JAK2O60674 1132 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 STAM2O75886 525 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 FOSP01100 380 aaPredicted RBP11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 MYCP01106 439 aaPredicted RBP11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 NR3C2P08235 984 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 PDE4DQ08499 809 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 NPY5RQ15761 445 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 STXBP2Q15833 593 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 CCDC144BQ3MJ40 725 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 GALNT17Q6IS24 598 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 VSIG10LQ86VR7 867 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 BICD2Q8TD16 824 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 U2AF1L4Q8WU68 220 aaKnown RBP11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 SNX21Q969T3 373 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 DEFB118Q96PH6 123 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 PHF20Q9BVI0 1012 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 ZHX1Q9UKY1 873 aaPredicted RBP11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 FAM184BQ9ULE4 1060 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 PCDHA6Q9UN73 950 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 PCDHA8Q9Y5H6 950 aa11.98□□□□□ -0.49
CYCSP55-201ENST00000399027 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 SPDYE3A6NKU9 549 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 ADAMTS3O15072 1205 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 ADCY6O43306 1168 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 DTNBO60941 627 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 EIF3JO75822 258 aaKnown RBP11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 XBP1P17861 261 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 CNGA1P29973 690 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 CCND2P30279 289 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 NKX3-2P78367 333 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 MRPS9P82933 396 aaKnown RBP11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 HMGN5P82970 282 aaKnown RBP11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 PCNX4Q63HM2 1172 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 IQSEC1Q6DN90 963 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms