RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 NKRFO15226 690 aaKnown RBP eCLIP16.84■□□□□ 0.29
SEC13-208ENST00000397109 DYNC1LI2O43237 492 aaPredicted RBP16.84■□□□□ 0.29
SEC13-208ENST00000397109 ASGR1P07306 291 aa16.84■□□□□ 0.29
SEC13-208ENST00000397109 SYN1P17600 705 aa16.84■□□□□ 0.29
SEC13-208ENST00000397109 ARHGEF16Q5VV41 709 aa16.84■□□□□ 0.29
SEC13-208ENST00000397109 FANCBQ8NB91 859 aa16.84■□□□□ 0.29
SEC13-208ENST00000397109 SCFD2Q8WU76 684 aa16.84■□□□□ 0.29
SEC13-208ENST00000397109 PRO3102Q9H379 93 aa16.84■□□□□ 0.29
SEC13-208ENST00000397109 A0A1W2PPC1 479 aa16.83■□□□□ 0.28
SEC13-208ENST00000397109 GCOM1H8Y6P7 765 aaPredicted RBP16.83■□□□□ 0.28
SEC13-208ENST00000397109 POLR2MP0CAP2 368 aa16.83■□□□□ 0.28
SEC13-208ENST00000397109 BMP8BP34820 402 aa16.83■□□□□ 0.28
SEC13-208ENST00000397109 STXBP2Q15833 593 aa16.83■□□□□ 0.28
SEC13-208ENST00000397109 FSCN1Q16658 493 aaKnown RBP16.83■□□□□ 0.28
SEC13-208ENST00000397109 TRIM60Q495X7 471 aa16.83■□□□□ 0.28
SEC13-208ENST00000397109 APOA5Q6Q788 366 aa16.83■□□□□ 0.28
SEC13-208ENST00000397109 SRBD1Q8N5C6 995 aaKnown RBP16.83■□□□□ 0.28
SEC13-208ENST00000397109 VTI1AQ96AJ9 217 aa16.83■□□□□ 0.28
SEC13-208ENST00000397109 GDF15Q99988 308 aa16.83■□□□□ 0.28
SEC13-208ENST00000397109 COL20A1Q9P218 1284 aa16.83■□□□□ 0.28
SEC13-208ENST00000397109 RBM27Q9P2N5 1060 aaKnown RBP16.83■□□□□ 0.28
SEC13-208ENST00000397109 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 CTAGE5O15320 804 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 CABYRO75952 493 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 PLEKHA8P1O95397 391 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 RXRAP19793 462 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 PSMA5P28066 241 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 FGD1P98174 961 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 PPP2R5BQ15173 497 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 MICU3Q86XE3 530 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 PIBF1Q8WXW3 757 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 USP26Q9BXU7 913 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 PXMP2Q9NR77 195 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 RBM28Q9NW13 759 aaKnown RBP16.82■□□□□ 0.28
SEC13-208ENST00000397109 SNX14Q9Y5W7 946 aa16.82■□□□□ 0.28
SEC13-208ENST00000397109 ZBTB43O43298 467 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 NR3C2P08235 984 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 MAGEA10P43363 369 aaPredicted RBP16.81■□□□□ 0.28
SEC13-208ENST00000397109 RCAN1P53805 252 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 IRX5P78411 483 aaPredicted RBP16.81■□□□□ 0.28
SEC13-208ENST00000397109 BEX3Q00994 111 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 TLE2Q04725 743 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 TTLL4Q14679 1199 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 BRDTQ58F21 947 aaPredicted RBP16.81■□□□□ 0.28
SEC13-208ENST00000397109 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 TMTC3Q6ZXV5 915 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 TCEANC2Q96MN5 208 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
SEC13-208ENST00000397109 TOX2Q96NM4 488 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 LBHD1Q9BQE6 289 aaPredicted RBP16.81■□□□□ 0.28
SEC13-208ENST00000397109 MROH7Q68CQ1 1323 aa16.81■□□□□ 0.28
SEC13-208ENST00000397109 A0A0U1RQG5 324 aaPredicted RBP16.8■□□□□ 0.28
SEC13-208ENST00000397109 EIF3JO75822 258 aaKnown RBP16.8■□□□□ 0.28
SEC13-208ENST00000397109 SEC24BO95487 1268 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 TXNP10599 105 aaKnown RBP16.8■□□□□ 0.28
SEC13-208ENST00000397109 EIF2AK2P19525 551 aaKnown RBP16.8■□□□□ 0.28
SEC13-208ENST00000397109 CPT1AP50416 773 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 ANKRD33Q7Z3H0 272 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 OR6J1Q8NGC5 347 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 SEZ6LQ9BYH1 1024 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 DCDC2CA8MYV0 355 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
SEC13-208ENST00000397109 RTN1Q16799 776 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 TMEM63BQ5T3F8 832 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 RAB11FIP4Q86YS3 637 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 CUL5Q93034 780 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 PDCD2LQ9BRP1 358 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 POLR3EQ9NVU0 708 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 BRPF3Q9ULD4 1205 aa16.8■□□□□ 0.28
SEC13-208ENST00000397109 KLF18A0A0U1RQI7 1052 aa16.79■□□□□ 0.28
SEC13-208ENST00000397109 ARVCFO00192 962 aa16.79■□□□□ 0.28
SEC13-208ENST00000397109 PQBP1O60828 265 aaKnown RBP16.79■□□□□ 0.28
SEC13-208ENST00000397109 CLTBP09497 229 aa16.79■□□□□ 0.28
SEC13-208ENST00000397109 CDK7P50613 346 aa16.79■□□□□ 0.28
SEC13-208ENST00000397109 CCDC62Q6P9F0 684 aa16.79■□□□□ 0.28
SEC13-208ENST00000397109 CXCL17Q6UXB2 119 aa16.79■□□□□ 0.28
SEC13-208ENST00000397109 SEPT14Q6ZU15 432 aa16.79■□□□□ 0.28
SEC13-208ENST00000397109 CMTR1Q8N1G2 835 aaKnown RBP16.79■□□□□ 0.28
SEC13-208ENST00000397109 FBXL16Q8N461 479 aa16.79■□□□□ 0.28
SEC13-208ENST00000397109 PRDM5Q9NQX1 630 aaPredicted RBP16.79■□□□□ 0.28
SEC13-208ENST00000397109 PDLIM7Q9NR12 457 aa16.79■□□□□ 0.28
SEC13-208ENST00000397109 GOLGA8AA7E2F4 631 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 GOLGA8BA8MQT2 603 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 KPNA6O60684 536 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 RPS6KB1P23443 525 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 CCND2P30279 289 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 KCNV1Q6PIU1 500 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 Q6ZUG5 572 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 VSIG10LQ86VR7 867 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 FCHSD1Q86WN1 690 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 UBE2OQ9C0C9 1292 aaKnown RBP16.78■□□□□ 0.28
SEC13-208ENST00000397109 KIAA1217Q5T5P2 1943 aa16.78■□□□□ 0.28
SEC13-208ENST00000397109 CCDC196A0A1B0GTZ2 297 aa16.77■□□□□ 0.28
SEC13-208ENST00000397109 PIK3CDO00329 1044 aa16.77■□□□□ 0.28
SEC13-208ENST00000397109 TLR3O15455 904 aaKnown RBP16.77■□□□□ 0.28
SEC13-208ENST00000397109 MYCLP12524 364 aaPredicted RBP16.77■□□□□ 0.28
SEC13-208ENST00000397109 CPA1P15085 419 aa16.77■□□□□ 0.28
SEC13-208ENST00000397109 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
SEC13-208ENST00000397109 PTGS1P23219 599 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms