RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 WDR59Q6PJI9 974 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 TICAM2Q86XR7 235 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 COA7Q96BR5 231 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 PLA2G12BQ9BX93 195 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 DCP1AQ9NPI6 582 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 RBM12Q9NTZ6 932 aaKnown RBP16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 TMEM260Q9NX78 707 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 STIM2Q9P246 746 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 SPATA31A1Q5TZJ5 1347 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 ITIH6Q6UXX5 1313 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 PSMD14O00487 310 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 PBX1P40424 430 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 KLHL30Q0D2K2 578 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 GIMAP7Q8NHV1 300 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 CELF1Q92879 486 aaKnown RBP16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 DPH5Q9H2P9 285 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
RAPGEF4-201ENST00000397081 FGFR1OPO95684 399 aaKnown RBP16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 CARSP49589 748 aaKnown RBP16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 HERC4Q5GLZ8 1057 aaPredicted RBP16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 KSR1Q8IVT5 923 aa16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 JPH2Q9BR39 696 aaPredicted RBP16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 TCP1P17987 556 aaKnown RBP16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 CALCRLQ16602 461 aa16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 SH3RF1Q7Z6J0 888 aa16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 THAP9Q9H5L6 903 aa16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 EFCC1Q9HA90 598 aa16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 SNX12Q9UMY4 172 aa16.27■□□□□ 0.2
RAPGEF4-201ENST00000397081 LOC102724159A0A0B4J2E5 919 aa16.27■□□□□ 0.19
RAPGEF4-201ENST00000397081 G3V3G9 751 aa16.27■□□□□ 0.19
RAPGEF4-201ENST00000397081 PWP2Q15269 919 aaKnown RBP16.27■□□□□ 0.19
RAPGEF4-201ENST00000397081 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.19
RAPGEF4-201ENST00000397081 DCAF8Q5TAQ9 597 aa16.27■□□□□ 0.19
RAPGEF4-201ENST00000397081 FAM133AQ8N9E0 248 aa16.27■□□□□ 0.19
RAPGEF4-201ENST00000397081 OR2W6PQ8NHA6 318 aa16.27■□□□□ 0.19
RAPGEF4-201ENST00000397081 SPATA20Q8TB22 786 aa16.27■□□□□ 0.19
RAPGEF4-201ENST00000397081 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 CORO7P57737 925 aa16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 CDHR2Q9BYE9 1310 aa16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 GNAQP50148 359 aa16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 WDR93Q6P2C0 686 aa16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 IRF2BP1Q8IU81 584 aa16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 RAB34Q9BZG1 259 aa16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 PALMO75781 387 aa16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 LRRC47Q8N1G4 583 aaKnown RBP16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 NLRP3Q96P20 1036 aa16.26■□□□□ 0.19
RAPGEF4-201ENST00000397081 EPHB4P54760 987 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 AMPD2Q01433 879 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 SFMBT2Q5VUG0 894 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 CPLX4Q7Z7G2 160 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 REXO1Q8N1G1 1221 aaKnown RBP16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 SELENOSQ9BQE4 189 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 PNPLA7Q6ZV29 1317 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 PHRF1Q9P1Y6 1649 aaKnown RBP16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 MYO1FO00160 1098 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 FGFR2P21802 821 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 TRAPPC10P48553 1259 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 DHTKD1Q96HY7 919 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 PIGSQ96S52 555 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 UBXN6Q9BZV1 441 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 TRIM9Q9C026 710 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 EPHB6O15197 1021 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 SRGNP10124 158 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 GNA11P29992 359 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 PAK2Q13177 524 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 CT47A1Q5JQC4 288 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 CCDC121Q6ZUS5 278 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 MICALCLQ6ZW33 695 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 NEK8Q86SG6 692 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 CCDC170Q8IYT3 715 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 GOLGA8KD6RF30 607 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 HSPA1LP34931 641 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 VWA3BQ502W6 1294 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
RAPGEF4-201ENST00000397081 FRMD3A2A2Y4 597 aa16.24■□□□□ 0.19
RAPGEF4-201ENST00000397081 TMEM110-MUSTN1A8MSY1 372 aa16.24■□□□□ 0.19
RAPGEF4-201ENST00000397081 DDX42Q86XP3 938 aaKnown RBP eCLIP16.24■□□□□ 0.19
RAPGEF4-201ENST00000397081 TSEN2Q8NCE0 465 aaKnown RBP16.24■□□□□ 0.19
RAPGEF4-201ENST00000397081 BAG3O95817 575 aa16.24■□□□□ 0.19
RAPGEF4-201ENST00000397081 CTNNA1P35221 906 aaKnown RBP16.24■□□□□ 0.19
RAPGEF4-201ENST00000397081 IL6STP40189 918 aaPredicted RBP16.24■□□□□ 0.19
RAPGEF4-201ENST00000397081 ZIM3Q96PE6 472 aa16.24■□□□□ 0.19
RAPGEF4-201ENST00000397081 ABCB4P21439 1286 aa16.24■□□□□ 0.19
RAPGEF4-201ENST00000397081 GBP6Q6ZN66 633 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 ELOA2Q8IYF1 753 aaPredicted RBP16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 FAM84BQ96KN1 310 aaPredicted RBP16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 ARHGAP20Q9P2F6 1191 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 PCDHA6Q9UN73 950 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 PCDHA8Q9Y5H6 950 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 GNPATO15228 680 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 E2F5Q15329 346 aa16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 ARL6IP4Q66PJ3 421 aaKnown RBP16.23■□□□□ 0.19
RAPGEF4-201ENST00000397081 CABS1Q96KC9 395 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms