RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 SEPT11Q9NVA2 429 aaKnown RBP13.26□□□□□ -0.29
ATN1-202ENST00000396684 PANK4Q9NVE7 773 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 KRT13P13646 458 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 CASP1P29466 404 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 CAP2P40123 477 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 USP11P51784 963 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 RASGRP2Q7LDG7 609 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 CCDC84Q86UT8 332 aaPredicted RBP13.26□□□□□ -0.29
ATN1-202ENST00000396684 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 SPAG5Q96R06 1193 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 BAG1Q99933 345 aaPredicted RBP13.26□□□□□ -0.29
ATN1-202ENST00000396684 MRPL44Q9H9J2 332 aaKnown RBP13.26□□□□□ -0.29
ATN1-202ENST00000396684 TACC3Q9Y6A5 838 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 ROBO3Q96MS0 1386 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 WNT10BO00744 389 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 FOXN1O15353 648 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 GRIN1Q05586 938 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 KCNJ18B7U540 433 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 TRIM14Q14142 442 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 KCNJ12Q14500 433 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 ACER1Q8TDN7 264 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 RAVER2Q9HCJ3 691 aaKnown RBP13.25□□□□□ -0.29
ATN1-202ENST00000396684 IVNS1ABPQ9Y6Y0 642 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 WDR46O15213 610 aaKnown RBP13.25□□□□□ -0.29
ATN1-202ENST00000396684 AKR1B10O60218 316 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 GCNT3O95395 438 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 CUL4BQ13620 913 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 MAEAQ7L5Y9 396 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 ARMC9Q7Z3E5 817 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 RRAGDQ9NQL2 400 aaPredicted RBP13.25□□□□□ -0.29
ATN1-202ENST00000396684 ECE1P42892 770 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 MTMR2Q13614 643 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 LDHDQ86WU2 507 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 A0A0U1RQG5 324 aaPredicted RBP13.25□□□□□ -0.29
ATN1-202ENST00000396684 CYTH3O43739 400 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 USO1O60763 962 aaKnown RBP13.25□□□□□ -0.29
ATN1-202ENST00000396684 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
ATN1-202ENST00000396684 URI1O94763 535 aaPredicted RBP13.25□□□□□ -0.29
ATN1-202ENST00000396684 CYLC1P35663 651 aaPredicted RBP13.25□□□□□ -0.29
ATN1-202ENST00000396684 NCAPG2Q86XI2 1143 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 NEK11Q8NG66 645 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 GMCL1Q96IK5 515 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 FAM20AQ96MK3 541 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 CCSER1Q9C0I3 900 aa13.25□□□□□ -0.29
ATN1-202ENST00000396684 EIF2AK2P19525 551 aaKnown RBP13.24□□□□□ -0.29
ATN1-202ENST00000396684 PRAMEF18Q5VWM3 479 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 ARGLU1Q9NWB6 273 aaPredicted RBP13.24□□□□□ -0.29
ATN1-202ENST00000396684 CALUO43852 315 aaPredicted RBP13.24□□□□□ -0.29
ATN1-202ENST00000396684 CTNND1O60716 968 aaKnown RBP13.24□□□□□ -0.29
ATN1-202ENST00000396684 CCDC175P0C221 793 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 FDX1P10109 184 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 RNF207Q6ZRF8 634 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 DHTKD1Q96HY7 919 aaPredicted RBP13.24□□□□□ -0.29
ATN1-202ENST00000396684 BPIFA3Q9BQP9 254 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 TMEM60Q9H2L4 133 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 CDC25BP30305 580 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 KMT5BQ4FZB7 885 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 GMCL1P1Q8NEA9 526 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 RPAP3Q9H6T3 665 aaPredicted RBP13.24□□□□□ -0.29
ATN1-202ENST00000396684 MKRN1Q9UHC7 482 aaKnown RBP13.24□□□□□ -0.29
ATN1-202ENST00000396684 COL4A3BPQ9Y5P4 624 aa13.24□□□□□ -0.29
ATN1-202ENST00000396684 EPB41P11171 864 aaKnown RBP13.23□□□□□ -0.29
ATN1-202ENST00000396684 GNG11P61952 73 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 DCAF17Q5H9S7 520 aaPredicted RBP13.23□□□□□ -0.29
ATN1-202ENST00000396684 USP37Q86T82 979 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 TMX2Q9Y320 296 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 YDJCA8MPS7 323 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 MEIS1O00470 390 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 COBLO75128 1261 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 CASQ1P31415 396 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 SMTNP53814 917 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 HMGCS2P54868 508 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 SARM1Q6SZW1 724 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.23□□□□□ -0.29
ATN1-202ENST00000396684 CCDC169A6NNP5 214 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 PLA2G4BP0C869 781 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 LRMPQ12912 555 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 NKX2-3Q8TAU0 364 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 HOXC10Q9NYD6 342 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 FRMD4BQ9Y2L6 1034 aa13.23□□□□□ -0.29
ATN1-202ENST00000396684 ATP1A3P13637 1013 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 SETQ01105 290 aaPredicted RBP13.22□□□□□ -0.29
ATN1-202ENST00000396684 GABPAQ06546 454 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 EARS2Q5JPH6 523 aaKnown RBP13.22□□□□□ -0.29
ATN1-202ENST00000396684 DPF2Q92785 391 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 GINM1Q9NU53 330 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 NRBP1Q9UHY1 535 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 RWDD2AQ9UIY3 292 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 HPSEQ9Y251 543 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 NOP56O00567 594 aaKnown RBP13.22□□□□□ -0.29
ATN1-202ENST00000396684 ERCC3P19447 782 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 C17orf53Q8N3J3 647 aaPredicted RBP13.22□□□□□ -0.29
ATN1-202ENST00000396684 ZNF280CQ8ND82 737 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 EEF2KMTQ96G04 330 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 PDLIM2Q96JY6 352 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 SAMSN1Q9NSI8 373 aaKnown RBP13.22□□□□□ -0.29
ATN1-202ENST00000396684 RNF146Q9NTX7 359 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms